LOCUS AEE77041.1 161 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF-hand family protein
protein.
ACCESSION CP002686-4758
PROTEIN_ID AEE77041.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G25600"
/gene_synonym="T5M7.6"
/inference="Similar to RNA sequence,
EST:INSD:DR333196.1,INSD:EH824736.1,INSD:EH867098.1,
INSD:EL337767.1,INSD:EL313427.1,INSD:CB252458.1,
INSD:DR333200.1,INSD:EL200739.1,INSD:EG458479.1,
INSD:EH848271.1,INSD:EL061434.1,INSD:EL200859.1,
INSD:AV554368.1,INSD:AU236548.1,INSD:EH853790.1,
INSD:EH850653.1,INSD:EL156270.1,INSD:EG458478.1,
INSD:DR333197.1,INSD:DR333198.1,INSD:EL019911.1,
INSD:BP671921.1,INSD:DR333199.1,INSD:DR333201.1,
INSD:DN604784.1,INSD:EL189789.1,INSD:EH796532.1,
INSD:AU227499.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825424.1,INSD:BX826076.1,INSD:BT014869.1,
INSD:BT003928.1"
/note="Calcium-binding EF-hand family protein; FUNCTIONS
IN: calcium ion binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1,
calcium-binding site (InterPro:IPR018247), EF-HAND 2
(InterPro:IPR018249), Calcium-binding EF-hand
(InterPro:IPR002048), EF-hand-like domain
(InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST
Arabidopsis thaliana protein match is: EF hand
calcium-binding protein family (TAIR:AT1G18530.1); Has
23107 Blast hits to 15210 proteins in 1505 species: Archae
- 1; Bacteria - 136; Metazoa - 8522; Fungi - 5826; Plants
- 5264; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G25600"
/db_xref="Araport:AT3G25600"
BEGIN
1 MASTKPTDQI KQLKDIFARF DMDKDGSLTQ LELAALLRSL GIKPRGDQIS LLLNQIDRNG
61 NGSVEFDELV VAILPDINEE VLINQEQLME VFRSFDRDGN GSITAAELAG SMAKMGHPLT
121 YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
//