LOCUS AEE77005.1 393 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Auxin-responsive family protein protein.
ACCESSION CP002686-4709
PROTEIN_ID AEE77005.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G25290"
/inference="Similar to RNA sequence,
EST:INSD:AV566995.1,INSD:DR376231.1,INSD:ES025762.1,
INSD:AV522421.1,INSD:BE530333.1,INSD:EL993206.1,
INSD:DR227965.1,INSD:DR334779.1,INSD:AV817264.1,
INSD:DR355552.1,INSD:BE522695.1,INSD:AV562086.1,
INSD:AV830371.1,INSD:DR355553.1,INSD:BE522696.1,
INSD:ES063933.1,INSD:AV811491.1,INSD:BX838372.1,
INSD:BP643018.1,INSD:ES018152.1,INSD:ES024205.1,
INSD:AV543090.1,INSD:ES178535.1,INSD:ES073221.1,
INSD:ES071078.1,INSD:Z17600.1,INSD:CD534199.1,
INSD:BP642212.1,INSD:BE529427.1,INSD:ES121279.1,
INSD:ES049495.1,INSD:ES109441.1,INSD:DR355551.1,
INSD:EG450286.1,INSD:EH803718.1,INSD:ES098995.1,
INSD:ES199939.1,INSD:ES000888.1,INSD:EG450275.1,
INSD:BP805362.1,INSD:BX835057.1,INSD:DR381046.1,
INSD:BP619464.1,INSD:ES012515.1,INSD:ES164623.1,
INSD:BP796529.1,INSD:ES144263.1,INSD:AA597362.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823404.1,INSD:AY057704.1,INSD:BX823803.1,
INSD:BX824171.1,INSD:BT002214.1"
/note="Auxin-responsive family protein; INVOLVED IN:
multicellular organismal development; LOCATED IN: plasma
membrane, membrane; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877),
Uncharacterised conserved protein UCP037471
(InterPro:IPR017214), Protein of unknown function DUF568,
DOMON-like (InterPro:IPR007613), DOMON related
(InterPro:IPR005018), Cytochrome b561/ferric reductase
transmembrane (InterPro:IPR006593); BEST Arabidopsis
thaliana protein match is: Auxin-responsive family protein
(TAIR:AT4G12980.1); Has 645 Blast hits to 645 proteins in
99 species: Archae - 0; Bacteria - 6; Metazoa - 61; Fungi
- 90; Plants - 468; Viruses - 0; Other Eukaryotes - 20
(source: NCBI BLink)."
/db_xref="TAIR:AT3G25290"
/db_xref="Araport:AT3G25290"
intron_pos 219:0 (1/2)
intron_pos 304:0 (2/2)
BEGIN
1 MSSSSSVRIS LSFIFLALLI SPAVSQTCKS QTFSGDKTYP HCLDLPQLKA FLHYSYDASN
61 TTLAVVFSAP PAKPGGWIAW AINPKATGMV GSQTLVAYKD PGNGVAVVKT LNISSYSSLI
121 PSKLAFDVWD MKAEEAARDG GSLRIFARVK VPADLVAKGK VNQVWQVGPE LGPGGMIGRH
181 AFDSANLASM SSLDLKGDNS GGTISGGDEV NAKIKNRNIH GILNAVSWGI LFPIGAIIAR
241 YMRVFDSADP AWFYLHVSCQ FSAYVIGVAG WATGLKLGNE SEGIRFSAHR NIGIALFTLA
301 TIQMFAMLLR PKKDHKYRFY WNIYHHGVGY AILTLGIINV FKGLNILKPQ DTYKTAYIAV
361 IAVLGGIALL LEAITWVVVL KRKSNNSMKP LRT
//