LOCUS AEE77003.1 343 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribonuclease H-like superfamily protein
protein.
ACCESSION CP002686-4707
PROTEIN_ID AEE77003.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G25270"
/inference="Similar to RNA sequence,
EST:INSD:EG419445.1,INSD:EG419433.1,INSD:EG419439.1,
INSD:EG419448.1,INSD:EG419441.1,INSD:EG419450.1,
INSD:EG419438.1,INSD:EG419446.1,INSD:EG419443.1,
INSD:EG419434.1,INSD:EG419447.1,INSD:EG419435.1,
INSD:EG419444.1,INSD:EG419436.1,INSD:EG419437.1,
INSD:EG419449.1"
/note="Ribonuclease H-like superfamily protein; FUNCTIONS
IN: nucleic acid binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Polynucleotidyl transferase,
ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA
polymerase (reverse transcriptase), related
(InterPro:IPR015706); BEST Arabidopsis thaliana protein
match is: Polynucleotidyl transferase, ribonuclease H-like
superfamily protein (TAIR:AT2G04420.1); Has 1562 Blast
hits to 1555 proteins in 146 species: Archae - 20;
Bacteria - 208; Metazoa - 1; Fungi - 0; Plants - 1330;
Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink)."
/db_xref="TAIR:AT3G25270"
/db_xref="Araport:AT3G25270"
BEGIN
1 MDPEIQPPPG KAEIKAKIWK LKTAPKIKHF LWKLLSGALA TGDNLKRRHI RNHPQCHRCC
61 QEDETSQHLF FDCFYAQQVW RASGIPHQEL RTTGITMETK MELLLSSCLA NRQPQLFNLA
121 IWILWRLWKS RNQLVFQQKS ISWQNTLQRA RNDVQEWEDT NTYVQSLNQQ VHSSRHQQPT
181 MARTKWQRPP STWIKYNYDG AFNHQTRNAK AGWLMRDENG VYMGSGQAIG STTSDSLESE
241 FQALIIAMQH AWSQGYRKVI FEGDSKQVEE LMNNEKLNFG RFNWIREGRF WQKRFEEAVF
301 KWVPRTNNQP ADILAKHHLQ PNQSFKFHYY VPAFITSTLY YDH
//