LOCUS AEE76957.1 1957 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Helicase/SANT-associated, DNA binding
protein protein.
ACCESSION CP002686-4642
PROTEIN_ID AEE76957.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G24880"
/inference="Similar to RNA sequence,
EST:INSD:ES123301.1,INSD:AV442458.1,INSD:ES048537.1,
INSD:ES169606.1,INSD:ES100711.1,INSD:ES174226.1,
INSD:ES104010.1,INSD:ES094195.1,INSD:ES138947.1,
INSD:CD533799.1,INSD:ES149727.1,INSD:ES078790.1"
/note="Helicase/SANT-associated, DNA binding protein;
FUNCTIONS IN: DNA binding; EXPRESSED IN: cultured cell;
CONTAINS InterPro DOMAIN/s: SANT, DNA-binding
(InterPro:IPR001005), HSA (InterPro:IPR006562),
Homeodomain-like (InterPro:IPR009057), HAS subgroup
(InterPro:IPR013999), Helicase/SANT-associated, DNA
binding (InterPro:IPR014012), MYB-like
(InterPro:IPR017877); BEST Arabidopsis thaliana protein
match is: Helicase/SANT-associated, DNA binding protein
(TAIR:AT3G24870.1); Has 17312 Blast hits to 12172 proteins
in 594 species: Archae - 4; Bacteria - 677; Metazoa -
8001; Fungi - 2909; Plants - 1838; Viruses - 51; Other
Eukaryotes - 3832 (source: NCBI BLink)."
/db_xref="TAIR:AT3G24880"
/db_xref="Araport:AT3G24880"
intron_pos 47:2 (1/22)
intron_pos 66:0 (2/22)
intron_pos 98:2 (3/22)
intron_pos 553:0 (4/22)
intron_pos 593:0 (5/22)
intron_pos 661:0 (6/22)
intron_pos 724:0 (7/22)
intron_pos 751:0 (8/22)
intron_pos 770:1 (9/22)
intron_pos 943:0 (10/22)
intron_pos 961:0 (11/22)
intron_pos 976:1 (12/22)
intron_pos 1042:0 (13/22)
intron_pos 1060:0 (14/22)
intron_pos 1087:0 (15/22)
intron_pos 1133:0 (16/22)
intron_pos 1172:0 (17/22)
intron_pos 1194:1 (18/22)
intron_pos 1220:0 (19/22)
intron_pos 1253:2 (20/22)
intron_pos 1318:2 (21/22)
intron_pos 1445:0 (22/22)
BEGIN
1 MHGSVSGYLL VNAEVDSMGG VIDSGGGIGV KTSPRRTAIE KAQAELRQEY DVREERRREL
61 EFLEKGGNPL DFKFGIATSH SVQSTSLTDQ QAEHFVNSEV KDSFALTASP HGDSVESSGR
121 PGVPTISEPN TADNLLLFDS ENKSVEGERN LRHPNRQNRT SESERSSKAH TNQNTKETED
181 SAIFRPYARR NRSKISRDPA RSSSTDLVQN RGGLATSISI RRGSVEGKGC IPEAANQKDM
241 HTTSVSCPVF ANSNGNIVPK NRVSSNSLNT KVDGEPVVRE STAGSKTSLL KDEADISYSK
301 SSAYLPVGES GLAGEKAQLV STGGSPKAAT IAGQKNSSTQ LNGLRDSTVE EESLTNRGAT
361 GTNGLESESS HANNVEVNVD NERDLYKVDK LDSDEISMQK TLRVEGLLDQ TVGEMTKTKI
421 EDETGQSTTI ISECIPECEM QMKSVKIENQ SHRSTAEMQT KEKSSETEKR LQDGLVVLEN
481 DSKVGSILSE NPSSTLCSGI PQASVDTSSC TVGNSLLSGT DIEALKHQPS SDAVMLDTVK
541 EDAILEEARI IQAKKKRIAE LSCGTAPVEV REKSQWDFVL EEMAWLANDF AQERLWKMTA
601 AAQICHRVAL TCQLRFEERN QHRKLKKIAS VLSNAILQFW SSVEAEVPGE LEETSLGIVK
661 ETCQESNCLN GRRCLAAGVK EYASRFLKYN NSSISYHSAA PSTPDNMCDP EILDISMVDQ
721 LTEASLFYSV PSGAMEVYLK SIESHLTRCE KSGSSMQEEV DTSAYDTAGD IGYNVTAFDE
781 DEGETSTYYL PGAFESSRSF NISHKKRKNL MKSHSARSYD LGDDLPYVNN TGGSNSSSLM
841 AKRPDSNINA GSVPTRRVRT ASRQRVVSPF GCATTGNLPV PSKTDASSGD TSSFQDEYSS
901 LHGGSAVQKG TEVESSVNFE KLLPYDMAET SGRPKKKKKT HQGSAYDQTW HLDPSVHVEQ
961 KDHWKKRPEN NFDMNGLYGP HSAKKQKTTK QLVENNFDMA IPHTGSIPSP AASQMSNMSN
1021 PNKSIKFIGG RDRGRKIKGL KISPGQHGSG NPWSLFEDQA LVVLVHDMGP NWELISDAMN
1081 STLKIKCIYR NPTECKDRHK ILMDKTAGDG ADSAEDSGNS QSYPSTLPGI PKGSARQLFQ
1141 RLQGPMEEDT LKSHFEKICL IGKKLHYRKT QSVIGVSVVS FVHGIQFSSC TGAGISQSLD
1201 IPGLHVSKYS CKSWLGFPEN DGRDSKQIVP VHNSQVMALS QVFPNNLNGG VLTPLDVCDA
1261 STSGQDVFSL ENPGLPMLNQ GTPVLPTSGA HPSTPGSSGV VLSNNLPTTS GLQSASVRDG
1321 RFNVPRGSLP LDEQHRLQQF NQTLSGRNLQ QPSLSTPAAV SGSDRGHRMV PGGNAMGVSG
1381 MNRNTPMSRP GFQGMASSAM PNTGSMLSSG MVEIPNTGNI HSGGGASQGN SMIRPREAVQ
1441 HMMRMQAAQG NSPGIPAFSN LSSGFTNQTT PVQAYPGHLS QQHQMSPQSH VLGNSHHPHL
1501 QSPSQATGAQ QEAFAIRQRQ IHQRYLQQQQ QQQQFPASGS MMPHVQQPQG SSVSSSPQNS
1561 PQTQPPVSPQ PLSMPPVSPS PNINAMAQQK PQKSQLALHG LGRSPQSGTS GVNNQAGKQR
1621 QRQLQQSARQ HPHQRQPTQG QQLNKQLKGM GRGNMIHQNI TVDQSHLNGL TMPQGNQATE
1681 KGEIAVPVRP DQQSSVGTTT STNLQSKPFV SPLSSNHSQQ LPKSFPGALP PSPQQQMQLH
1741 SDNSIQGQSS PATPCNILST SSPSIAPAVA PSNHQHLLIH QKQRNQVQST AQRVVQHNHL
1801 GNSELSKKSQ AERMPRVPQS VTNTTQTVSM GTTKGMPQAS NDLKNIKAVG STAVPALEPP
1861 SCVASVQITA SKVVNSSNTD SAGNDPVSTP NQGLAQKHGI KGVTQRQQQS LPSEEKRPKL
1921 PEKPTVQNQK HLASEEQPHL EEAQELSSSK PPDTKVE
//