LOCUS AEE76948.1 410 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana proteolysis 1 protein.
ACCESSION CP002686-4623
PROTEIN_ID AEE76948.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PRT1"
/locus_tag="AT3G24800"
/gene_synonym="proteolysis 1"
/inference="Similar to RNA sequence,
EST:INSD:DR749530.1,INSD:BE520583.1,INSD:BE520581.1,
INSD:BE520582.1,INSD:DR233664.1,INSD:ES119926.1,
INSD:AV790995.1,INSD:AV521469.1,INSD:ES084724.1,
INSD:CB264469.1,INSD:DR374896.1,INSD:BX834791.1,
INSD:AV544184.1,INSD:BP584398.1,INSD:EL321275.1,
INSD:BE520584.1,INSD:EL254813.1,INSD:DR749529.1,
INSD:BP807935.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824009.1,INSD:BX825028.1,INSD:AY114077.1,
INSD:AY080799.1,INSD:AJ224307.1,INSD:AY087139.1"
/note="proteolysis 1 (PRT1); CONTAINS InterPro DOMAIN/s:
Zinc finger, RING-type, conserved site
(InterPro:IPR017907), Zinc finger, RING-type
(InterPro:IPR001841), Zinc finger, ZZ-type
(InterPro:IPR000433); BEST Arabidopsis thaliana protein
match is: zinc finger (C3HC4-type RING finger) family
protein (TAIR:AT1G18660.1); Has 4154 Blast hits to 3358
proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa
- 2882; Fungi - 341; Plants - 509; Viruses - 3; Other
Eukaryotes - 419 (source: NCBI BLink)."
/db_xref="TAIR:AT3G24800"
/db_xref="Araport:AT3G24800"
intron_pos 30:2 (1/7)
intron_pos 40:1 (2/7)
intron_pos 100:1 (3/7)
intron_pos 130:1 (4/7)
intron_pos 210:1 (5/7)
intron_pos 276:1 (6/7)
intron_pos 316:0 (7/7)
BEGIN
1 MAETMKDITM KNDESQEEEI PDQFLCCVCL ELLYKPIVLS CGHLSCFWCV HKSMNGFRES
61 HCPICRDPYV HFPSVCQKLY FLLKKMYPLA HKKREEQVLK EEQERECFSP QIDLVLDLSV
121 CSGDSLNVSD KQKVEECSNA ANLLSSSSSR GDIPCIPKNQ EPTDAKALNV HENELLKDNK
181 VSKQISKDDL LCSACKELLV RPVVLNCGHV YCEGCVVDMA EESEKIKCQE CNVCDPRGFP
241 KVCLILEQLL EENFPEEYNS RSSKVQKTLA HNSKGNIQSY LKEGPSLSND NNNDDPWLAN
301 PGSNVHFGAG CDSCGVYPII GDRYRCKDCK EEIGYDLCKD CYETPSKVPG RFNQQHTPDH
361 RLELARSPQV LINFNSIGIL LGPVISNEGM DTDEGEEGPP GSSNESSSTE
//