LOCUS AEE76898.1 602 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Fibronectin type III domain-containing
protein protein.
ACCESSION CP002686-4549
PROTEIN_ID AEE76898.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="VRN5"
/locus_tag="AT3G24440"
/gene_synonym="VERNALIZATION 5"
/gene_synonym="VIL1"
/gene_synonym="VIN3-LIKE 1"
/inference="Similar to RNA sequence,
EST:INSD:ES162076.1,INSD:ES198147.1,INSD:EL145013.1,
INSD:DR380283.1,INSD:EH850265.1,INSD:ES167452.1,
INSD:DR243612.1,INSD:ES155802.1,INSD:EH826610.1,
INSD:EL024698.1,INSD:EL091672.1,INSD:ES156892.1,
INSD:AI999046.1"
/inference="Similar to RNA sequence, mRNA:INSD:EF064791.1"
/note="VERNALIZATION 5 (VRN5); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: histone
methylation, chromatin modification, vernalization
response, regulation of flower development; LOCATED IN:
chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1423, plant
(InterPro:IPR004082), Fibronectin, type III-like fold
(InterPro:IPR008957), Fibronectin, type III
(InterPro:IPR003961); BEST Arabidopsis thaliana protein
match is: Fibronectin type III domain-containing protein
(TAIR:AT5G57380.1); Has 273 Blast hits to 232 proteins in
29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi -
0; Plants - 265; Viruses - 1; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G24440"
/db_xref="Araport:AT3G24440"
intron_pos 142:2 (1/2)
intron_pos 240:1 (2/2)
BEGIN
1 MDSSSTKSKI SHSRKTNKKS NKKHESNGKQ QQQQDVDGGG GCLRSSWICK NASCRANVPK
61 EDSFCKRCSC CVCHNFDENK DPSLWLVCEP EKSDDVEFCG LSCHIECAFR EVKVGVIALG
121 NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL
181 HEIVRAAKSM LEDEVGPLDG PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANAGRD
241 LVPAACRFHF EDIAPKQVTL RLIELPSAVE YDVKGYKLWY FKKGEMPEDD LFVDCSRTER
301 RMVISDLEPC TEYTFRVVSY TEAGIFGHSN AMCFTKSVEI LKPVDGKEKR TIDLVGNAQP
361 SDREEKSSIS SRFQIGQLGK YVQLAEAQEE GLLEAFYNVD TEKICEPPEE ELPPRRPHGF
421 DLNVVSVPDL NEEFTPPDSS GGEDNGVPLN SLAEADGGDH DDNCDDAVSN GRRKNNNDCL
481 VISDGSGDDT GFDFLMTRKR KAISDSNDSE NHECDSSSID DTLEKCVKVI RWLEREGHIK
541 TTFRVRFLTW FSMSSTAQEQ SVVSTFVQTL EDDPGSLAGQ LVDAFTDVVS TKRPNNGVMT
601 SH
//