LOCUS AEE76894.1 418 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ATP-dependent caseinolytic (Clp)
protease/crotonase family protein protein.
ACCESSION CP002686-4541
PROTEIN_ID AEE76894.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G24360"
/inference="Similar to RNA sequence,
EST:INSD:EH869794.1,INSD:ES098735.1,INSD:ES139972.1,
INSD:DR295702.1,INSD:EL037095.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823016.1,INSD:BX823664.1"
/note="ATP-dependent caseinolytic (Clp) protease/crotonase
family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA
hydrolase activity, catalytic activity; INVOLVED IN: fatty
acid beta-oxidation, metabolic process; LOCATED IN:
membrane; EXPRESSED IN: 12 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Crotonase, core (InterPro:IPR001753); BEST Arabidopsis
thaliana protein match is: ATP-dependent caseinolytic
(Clp) protease/crotonase family protein
(TAIR:AT4G13360.1); Has 20885 Blast hits to 20875 proteins
in 1799 species: Archae - 367; Bacteria - 14429; Metazoa -
898; Fungi - 583; Plants - 486; Viruses - 0; Other
Eukaryotes - 4122 (source: NCBI BLink)."
/db_xref="TAIR:AT3G24360"
/db_xref="Araport:AT3G24360"
intron_pos 73:1 (1/9)
intron_pos 107:1 (2/9)
intron_pos 129:0 (3/9)
intron_pos 174:0 (4/9)
intron_pos 206:1 (5/9)
intron_pos 249:2 (6/9)
intron_pos 309:1 (7/9)
intron_pos 352:0 (8/9)
intron_pos 386:0 (9/9)
BEGIN
1 MIKSLSLASA RIFFSRTSPS FLIPFSKLSV SHRRKFSVMA SGSDEFVKGN VYPNGVALIT
61 LDRPKALNAM NLEMDLKYKS LLDEWEYDPG VKCVVVEGST SRAFCAGMDI KGVVAEILMD
121 KNTSLVQKVF TAEYSLICKI AGYRKPYISL MDGITMGFGL GLSGHGRYRV ITERTVLAMP
181 ENGIGLFPDV GFSYIAAHSP GEGSVGAYLG MTGRRISTPS DALFVGLGTH YVPSGKLGSL
241 REAILSADLS KDPQQHIQAT LSNYSSDPET ESHLQMLLPQ IESAFSVSKS VKETIEELKK
301 FQQSSEASVA EWANEAVQGI EKGAPFSLYL THKYFSKVAC AKGKTNNAMA TLNGVMITEY
361 RIALRSALRS DFTEGVRAVL TDKDQNPKWK PASLDEVDET EVDALFMPLS PEFEELNV
//