LOCUS AEE76868.1 950 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Beta-glucosidase, GBA2 type family
protein protein.
ACCESSION CP002686-4508
PROTEIN_ID AEE76868.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G24180"
/inference="Similar to RNA sequence,
EST:INSD:EH822352.1,INSD:BP618857.1,INSD:AV550895.1,
INSD:BP598997.1,INSD:T76924.1,INSD:EL136422.1,
INSD:EH841285.1,INSD:EL316064.1,INSD:AV560573.1,
INSD:AV546572.1,INSD:BP794873.1,INSD:BP794755.1,
INSD:AV548507.1,INSD:AV538586.1,INSD:BP789921.1,
INSD:AV817005.1,INSD:EL972860.1,INSD:AV815491.1,
INSD:BP599779.1,INSD:BP612222.1,INSD:BP778223.1,
INSD:EH914473.1,INSD:CF652532.1,INSD:ES033117.1,
INSD:AV815411.1,INSD:BP611413.1,INSD:ES118266.1,
INSD:BP614454.1,INSD:AV828263.1,INSD:AV547838.1,
INSD:EL235729.1,INSD:AV829020.1,INSD:BP781308.1,
INSD:EL193532.1,INSD:AV800897.1,INSD:AV803955.1,
INSD:EL022029.1,INSD:ES173614.1,INSD:AV537896.1,
INSD:BP787506.1,INSD:BP787737.1,INSD:EH973844.1,
INSD:AV806072.1,INSD:BP597907.1,INSD:ES138577.1,
INSD:EG525321.1,INSD:AV814549.1,INSD:AV549976.1,
INSD:EH863997.1,INSD:AI997457.1,INSD:EG458817.1,
INSD:BP783804.1"
/note="Beta-glucosidase, GBA2 type family protein;
FUNCTIONS IN: glucosylceramidase activity, catalytic
activity; INVOLVED IN: glucosylceramide catabolic process,
sphingolipid metabolic process; LOCATED IN: plasma
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Glucosylceramidase (InterPro:IPR006775), Six-hairpin
glycosidase-like (InterPro:IPR008928), Beta-glucosidase,
GBA2 type (InterPro:IPR014551); BEST Arabidopsis thaliana
protein match is: Beta-glucosidase, GBA2 type family
protein (TAIR:AT5G49900.1); Has 952 Blast hits to 742
proteins in 175 species: Archae - 79; Bacteria - 320;
Metazoa - 186; Fungi - 2; Plants - 267; Viruses - 0; Other
Eukaryotes - 98 (source: NCBI BLink)."
/db_xref="TAIR:AT3G24180"
/db_xref="Araport:AT3G24180"
intron_pos 28:0 (1/17)
intron_pos 65:0 (2/17)
intron_pos 84:0 (3/17)
intron_pos 109:2 (4/17)
intron_pos 143:0 (5/17)
intron_pos 167:2 (6/17)
intron_pos 201:1 (7/17)
intron_pos 236:0 (8/17)
intron_pos 254:0 (9/17)
intron_pos 272:2 (10/17)
intron_pos 285:2 (11/17)
intron_pos 333:0 (12/17)
intron_pos 394:2 (13/17)
intron_pos 417:1 (14/17)
intron_pos 441:2 (15/17)
intron_pos 462:1 (16/17)
intron_pos 867:2 (17/17)
BEGIN
1 MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE
61 AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS QGVPLGGMGS GSISRGFRGE
121 FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN
181 LNGQHSTYHA LFPRAWTIYD GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG
241 KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301 ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS
361 ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY GTSPRAALDL VHDALTNYKR
421 WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG
481 NSDGKVGGLD INDQRNDLGN GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL
541 EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601 VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV
661 RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC GCLWLAALQA AAAMALQIGD
721 KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL
781 FEESKIRSTM QKIFDFNVMK TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM
841 ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901 SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC
//