LOCUS AEE76864.1 364 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana putative type 1 membrane protein protein.
ACCESSION CP002686-4504
PROTEIN_ID AEE76864.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PMP"
/locus_tag="AT3G24160"
/gene_synonym="putative type 1 membrane protein"
/inference="Similar to RNA sequence,
EST:INSD:DR335291.1,INSD:BP669460.1,INSD:DR335278.1,
INSD:DR335283.1,INSD:BP860761.1,INSD:EH981463.1,
INSD:AV440023.1,INSD:BP566119.1,INSD:BP562863.3,
INSD:BP578841.1,INSD:AV815104.1,INSD:DR342162.1,
INSD:BP845168.1,INSD:EH934621.1,INSD:EL068218.1,
INSD:ES056263.1,INSD:DR335273.1,INSD:AV819707.1,
INSD:BP620475.1,INSD:BP606247.1,INSD:AV561106.1,
INSD:BP664801.1,INSD:ES003589.1,INSD:AV821055.1,
INSD:AV527195.1,INSD:EL233441.1,INSD:AV803328.1,
INSD:AV821063.1,INSD:DR335261.1,INSD:BP862022.1,
INSD:DR335285.1,INSD:EH934022.1,INSD:EL085568.1,
INSD:ES136665.1,INSD:BP577021.1,INSD:EG514115.1,
INSD:BP645538.1,INSD:ES215666.1,INSD:AV812718.1,
INSD:ES168482.1,INSD:EL021845.1,INSD:DR335286.1,
INSD:BP584201.1,INSD:EL073035.1,INSD:DR335288.1,
INSD:EL024215.1,INSD:AV808783.1,INSD:DR335271.1,
INSD:EL341792.1,INSD:EL325607.1,INSD:H36194.1,
INSD:ES174674.1,INSD:EL297089.1,INSD:EH877258.1,
INSD:EL023049.1,INSD:AV792306.1,INSD:BP831324.1,
INSD:EL110939.1,INSD:BP654630.1,INSD:DR342163.1,
INSD:DR335269.1,INSD:DR335262.1,INSD:EL255726.1,
INSD:BP567562.1,INSD:BP629679.1,INSD:BP798562.1,
INSD:EL106608.1,INSD:EL247166.1,INSD:BP576437.1,
INSD:DR335280.1,INSD:BP826897.1,INSD:EL237191.1,
INSD:EL036114.1,INSD:EH914009.1,INSD:AV789730.1,
INSD:DR335282.1,INSD:DR335277.1,INSD:AV797996.1,
INSD:AV827363.1,INSD:DR335275.1,INSD:EL311773.1,
INSD:EH805071.1,INSD:BP817159.1,INSD:BP592346.1,
INSD:EH977005.1,INSD:ES012470.1,INSD:BP633787.1,
INSD:EL176144.1,INSD:BP854726.1,INSD:EH918523.1,
INSD:ES156404.1,INSD:BP646345.1,INSD:BP584756.1,
INSD:BP594163.1,INSD:BP648738.1,INSD:ES061679.1,
INSD:EH920773.1,INSD:DR335290.1,INSD:AV803396.1,
INSD:DR335267.1,INSD:BP564457.1,INSD:DR335270.1,
INSD:EL291340.1,INSD:EL237511.1,INSD:EL218751.1,
INSD:AI100759.1,INSD:AV541606.1,INSD:BP812504.1,
INSD:EH923399.1,INSD:BP617084.1,INSD:AV812862.1,
INSD:BP826068.1,INSD:AV813727.1,INSD:BP845000.1,
INSD:EH822157.1,INSD:BP832296.1,INSD:BP812139.1,
INSD:DR335268.1,INSD:EH838809.1,INSD:BP564836.1,
INSD:EL030958.1,INSD:AV520748.1,INSD:ES159507.1,
INSD:DR335265.1,INSD:BP861450.1,INSD:BU635646.1,
INSD:ES092509.1,INSD:BP625136.1,INSD:DR335284.1,
INSD:EL237663.1,INSD:DR335272.1,INSD:BP577033.1,
INSD:BP606353.1,INSD:BP621404.1,INSD:DR335281.1,
INSD:DR335292.1,INSD:Z38043.1,INSD:EL201737.1,
INSD:ES035467.1,INSD:AV795933.1,INSD:DR335289.1,
INSD:BP659862.1,INSD:AV818939.1,INSD:BP811596.1,
INSD:AI996451.1,INSD:EG514191.1,INSD:BP577656.1,
INSD:BP657512.1,INSD:EL200814.1,INSD:BP594059.1,
INSD:EH898958.1,INSD:DR335276.1,INSD:DR335274.1,
INSD:EH847510.1,INSD:EL200189.1,INSD:BP577698.1,
INSD:BP626333.1,INSD:EL229701.1,INSD:T21878.1,
INSD:BP571254.1,INSD:AV819724.1,INSD:AV814282.1,
INSD:BP648190.1,INSD:DR335279.1,INSD:BP815029.1,
INSD:EL176443.1,INSD:AI239405.1,INSD:DR342164.1,
INSD:EH967464.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823688.1,INSD:AY133587.1,INSD:AF104329.1,
INSD:BX823500.1,INSD:AY085022.1,INSD:BT004240.1,
INSD:AY053413.1"
/note="putative type 1 membrane protein (PMP); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum, plasma membrane, membrane; EXPRESSED IN: 27
plant structures; EXPRESSED DURING: 15 growth stages; Has
39 Blast hits to 39 proteins in 15 species: Archae - 0;
Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G24160"
/db_xref="Araport:AT3G24160"
intron_pos 19:0 (1/10)
intron_pos 44:0 (2/10)
intron_pos 76:0 (3/10)
intron_pos 101:1 (4/10)
intron_pos 134:1 (5/10)
intron_pos 158:0 (6/10)
intron_pos 193:0 (7/10)
intron_pos 239:0 (8/10)
intron_pos 273:1 (9/10)
intron_pos 343:0 (10/10)
BEGIN
1 MKAFYVFVVA LLLTLNYRGE ASGSVFFIDG SNNQYLRPRS SSEALPMSPV EISAAVSALL
61 GFAPSATLTA DGSSKLNKIL KPNPFERPRA AFVLEIAGAD DMLLETSPSH SFLGNAIRSS
121 IKSDSYKADT ELPDNEVVVV SVNEPSSDVT DKDINDFASW LGGSYVAGAE PSSGLLSIPL
181 AGGANVEFNL EKEAERKFAL NLLGLYQNIR QAVSVYDDLS HGIDRTAELT VGRFGGIDAL
241 AQEYGQGMAK QGMDVLLSTL SKLFNLLETS HKGQIVGVIV LDERVNQESE NLLNFGSSRS
301 SARSMVEVEG IPSAAIIAEV ILVRLTLAWL TGIILLIATI LGVYFLMNMP LTKDTLLYSN
361 VKLD
//