LOCUS AEE76859.1 295 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002686-4497
PROTEIN_ID AEE76859.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G24120"
/inference="Similar to RNA sequence,
EST:INSD:BP560992.1,INSD:DR315670.1,INSD:ES116692.1,
INSD:EL012680.1,INSD:DR315671.1,INSD:ES136944.1,
INSD:AV565361.1,INSD:BP631573.1,INSD:ES008869.1,
INSD:DR315667.1,INSD:ES148753.1,INSD:EL239009.1,
INSD:DR371046.1,INSD:BP636249.1,INSD:AV809957.1,
INSD:BP778249.1,INSD:ES146572.1,INSD:ES143127.1,
INSD:DR315672.1,INSD:DR315668.1,INSD:AV784260.1,
INSD:ES150990.1,INSD:ES113215.1,INSD:ES162428.1,
INSD:BP610237.1,INSD:ES069693.1,INSD:ES143318.1,
INSD:ES168034.1,INSD:BP589162.1,INSD:ES110763.1,
INSD:ES167389.1,INSD:DR315666.1,INSD:ES080204.1,
INSD:CB255826.1,INSD:DR315664.1,INSD:DR315669.1,
INSD:BP823932.1,INSD:EL260625.1,INSD:DR315665.1,
INSD:EL318418.1,INSD:ES190234.1,INSD:EH938264.1,
INSD:ES139136.1,INSD:EH913546.1,INSD:BP597455.1,
INSD:BP794779.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825601.1,INSD:AY050355.1,INSD:AY094046.1,
INSD:AY088428.1"
/note="Homeodomain-like superfamily protein; CONTAINS
InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057),
Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional
regulator, Myb-type, DNA-binding (InterPro:IPR017930),
Myb-like DNA-binding domain, SHAQKYF class
(InterPro:IPR006447), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: Homeodomain-like superfamily protein
(TAIR:AT4G13640.1); Has 1710 Blast hits to 1694 proteins
in 69 species: Archae - 0; Bacteria - 2; Metazoa - 34;
Fungi - 0; Plants - 1651; Viruses - 0; Other Eukaryotes -
23 (source: NCBI BLink)."
/db_xref="TAIR:AT3G24120"
/db_xref="Araport:AT3G24120"
intron_pos 66:1 (1/5)
intron_pos 92:0 (2/5)
intron_pos 110:1 (3/5)
intron_pos 136:2 (4/5)
intron_pos 160:0 (5/5)
BEGIN
1 MYSAIRSLPL DGGHVGGDYH GPLDGTNLPG DACLVLTTDP KPRLRWTTEL HERFVDAVTQ
61 LGGPDKATPK TIMRTMGVKG LTLYHLKSHL QKFRLGRQAG KESTENSKDA SCVGESQDTG
121 SSSTSSMRMA QQEQNEGYQV TEALRAQMEV QRRLHDQLEV QRRLQLRIEA QGKYLQSILE
181 KACKAFDEQA ATFAGLEAAR EELSELAIKV SNSSQGTSVP YFDATKMMMM PSLSELAVAI
241 DNKNNITTNC SVESSLTSIT HGSSISAASM KKRQRGDNLG VGYESGWIMP SSTIG
//