LOCUS AEE76831.1 421 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana reverse transcriptase-like protein protein.
ACCESSION CP002686-4465
PROTEIN_ID AEE76831.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G23910"
/inference="Similar to RNA sequence,
EST:INSD:DR281719.1,INSD:BP623668.1,INSD:DR281707.1,
INSD:ES008257.1,INSD:BP849625.1,INSD:ES151177.1,
INSD:BX835606.1,INSD:BP847171.1,INSD:DR281712.1,
INSD:ES085557.1,INSD:DR281720.1,INSD:AV809241.1,
INSD:ES047416.1,INSD:DR281708.1,INSD:ES025401.1,
INSD:BX839430.1,INSD:DR281716.1,INSD:DR281715.1,
INSD:BP670795.1,INSD:AV555111.1,INSD:ES189635.1,
INSD:BP596893.1,INSD:DR281714.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY117360.1,INSD:Y09562.1,INSD:AY091054.1,
INSD:BX822778.1,INSD:BX842197.1"
/note="BEST Arabidopsis thaliana protein match is:
RNA-directed DNA polymerase (reverse
transcriptase)-related family protein (TAIR:AT3G24255.2);
Has 562 Blast hits to 532 proteins in 147 species: Archae
- 28; Bacteria - 51; Metazoa - 157; Fungi - 82; Plants -
85; Viruses - 6; Other Eukaryotes - 153 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G23910"
/db_xref="Araport:AT3G23910"
intron_pos 17:2 (1/11)
intron_pos 55:0 (2/11)
intron_pos 76:1 (3/11)
intron_pos 110:1 (4/11)
intron_pos 132:0 (5/11)
intron_pos 159:0 (6/11)
intron_pos 185:2 (7/11)
intron_pos 258:0 (8/11)
intron_pos 276:2 (9/11)
intron_pos 319:2 (10/11)
intron_pos 381:0 (11/11)
BEGIN
1 MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI
61 VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI ERLSQSHAQD SSRLQRDLEG
121 LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD
181 SLRKRFDAAE QVEDALTGLK VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH
241 ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301 KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS
361 LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA IEKILVEQTR EELQSNKSSQ
421 K
//