LOCUS AEE76796.1 765 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Sec23/Sec24 protein transport family
protein protein.
ACCESSION CP002686-4422
PROTEIN_ID AEE76796.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G23660"
/inference="Similar to RNA sequence,
EST:INSD:AU236502.1,INSD:ES150406.1,INSD:AI994453.1,
INSD:BP840376.1,INSD:EH826993.1,INSD:EG473670.1,
INSD:AU227445.1,INSD:EL298863.1,INSD:BX836520.1,
INSD:BE526004.1,INSD:EL025003.1,INSD:ES063141.1,
INSD:BX840819.1,INSD:EL989286.1,INSD:EG473669.1,
INSD:EL197362.1,INSD:EH958708.1,INSD:BP652871.1,
INSD:DR354182.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT002914.1,INSD:BX824963.1,INSD:BT005123.1"
/note="Sec23/Sec24 protein transport family protein;
FUNCTIONS IN: transporter activity, zinc ion binding;
INVOLVED IN: intracellular protein transport, transport,
ER to Golgi vesicle-mediated transport; LOCATED IN: COPII
vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Sec23/Sec24, helical domain (InterPro:IPR006900),
Sec23/Sec24 beta-sandwich (InterPro:IPR012990),
Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc
finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin
domain (InterPro:IPR007123); BEST Arabidopsis thaliana
protein match is: Sec23/Sec24 protein transport family
protein (TAIR:AT4G14160.2); Has 1418 Blast hits to 1403
proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa
- 517; Fungi - 392; Plants - 312; Viruses - 0; Other
Eukaryotes - 197 (source: NCBI BLink)."
/db_xref="TAIR:AT3G23660"
/db_xref="Araport:AT3G23660"
intron_pos 246:0 (1/11)
intron_pos 304:0 (2/11)
intron_pos 358:0 (3/11)
intron_pos 405:2 (4/11)
intron_pos 431:0 (5/11)
intron_pos 487:2 (6/11)
intron_pos 515:0 (7/11)
intron_pos 541:0 (8/11)
intron_pos 595:0 (9/11)
intron_pos 683:0 (10/11)
intron_pos 718:0 (11/11)
BEGIN
1 MAETANTDLE GIDGVRMTWN VWPHSKAEAS KCVIPLAACI SPIRRHADIP TLPYAPLRCR
61 TCSAALNAYA QVDFTAKLWI CPFCYQRNHF PPHYHVISET NLPGELYPQY TTVEYTLPPP
121 VANGEGLVDP PVFVFVLDTC MIEEELDFAK SALKQAIGLL PENALVGFVS FGTQAHVHEL
181 GFSEMSKVFV FKGDKEISKD QILDQLGLGG SSRRGGSKGP QNGFPSSGLN RFLLPASECE
241 FTLNSLLDEL QSDQWPVKPG HRSQRCTGVA LSVAAGLLGA CLPGTGARIV ALIGGPCTEG
301 PGTIVSKDLS DPVRSHKDLD KDAAPYYKKA VKFYDSIAKQ LVTQGHVLDL FASALDQVGV
361 AEMKVAVERT GGLVVLSESF GHSVFKDSFK RVFEDGDQAL GLCFNGTLEI CCSQDIKIQG
421 AIGPCSSLEK KGASVADTVI GEGNTSAWRL CGLDKTTCLT IFFDISSSGS NTPGAANPQF
481 YLQFLTSYQN PEGQTLLRVT TVCRQWIDSA VSSEELVQGF DQETAAVVMA RLASLKMESE
541 EGFDATRWLD RNLIRLCSKF GDYRKDDPAS FTLNPYFSLF PQFIFNLRRS QFVQVFNNSP
601 DETAYFCMLL NRENISNATV MIQPSLTTYS FNSPAEPALL DVASIAADRI LLLDAYFSVV
661 VFHGMTIAQW RNMGYHHQPE HQAFAELLQA PQEDSQMIVR ERFPVPRLVV CDQHGSQARF
721 LLAKLNPSAT YNNANEMSTG SDVIFTDDVS LQVFFEHLQK LVVQS
//