LOCUS AEE76758.1 771 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs)
family protein protein.
ACCESSION CP002686-4359
PROTEIN_ID AEE76758.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G23370"
/inference="Similar to RNA sequence,
EST:INSD:EG482119.1,INSD:EG482053.1,INSD:EG482042.1,
INSD:EG482064.1,INSD:EG482097.1,INSD:EG482497.1,
INSD:EG479553.1,INSD:EG479509.1,INSD:EG479464.1,
INSD:EG479453.1,INSD:EG479498.1,INSD:EG482541.1,
INSD:EG482108.1,INSD:EG479564.1,INSD:EG482585.1,
INSD:EG479409.1,INSD:EG479487.1,INSD:EG482552.1,
INSD:EH955105.1,INSD:EG482631.1,INSD:EG482563.1,
INSD:EG482598.1,INSD:EG482519.1"
/note="RNA-binding (RRM/RBD/RNP motifs) family protein;
FUNCTIONS IN: nucleic acid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; CONTAINS InterPro DOMAIN/s: RNA recognition
motif, RNP-1 (InterPro:IPR000504); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G23370"
/db_xref="Araport:AT3G23370"
intron_pos 19:1 (1/6)
intron_pos 50:2 (2/6)
intron_pos 493:0 (3/6)
intron_pos 519:0 (4/6)
intron_pos 619:0 (5/6)
intron_pos 704:2 (6/6)
BEGIN
1 MAIARLLSPK STPQFNNRGF VILTRRWLSS SLEDGRKCER LSDSEASTNK DIGQKVVHWY
61 SLGGLISNLK QKIMGNVILM DKSSGEDSVL PKSPMVSSSD VAVTKVVTLK NVAESENCIH
121 SSVKEEIGSE DASQSVAADN KICITSSIKE ESFVSEMGSQ DASQSVAVEN KNCISSSIKE
181 ESSVSEMGSQ DASQSVAGIE ACGKRESITV SNDRLGNINR LDGLESGQGK VLRSIRTERV
241 DPSEEQSSKD VTLGFLTEEV SESQTSSRKN MGKLQPAKGL FDKVKPPQNS LSKLFVNSDP
301 YKEVKHPLRF ETLSNSNSSM STGESCSDAG DQHSLFGKML SDPVQEIKSI PNENDEHRLS
361 DAPQNLSSLT SVLLRDWIDE QRSEDLAAIR ERKSIFSLES SRNTVAPMAV GTMKKLMDSL
421 NFPTDNGTDA EANSLNSNSR EEKWISEGNS AMQNSDRFCA IEEEEPQGET FVMETQSLCS
481 QDTLDATTVN PKFGAVLHVQ EIPSIEGCIY KDALLTFETN TAVKKALKKG HVTVMNYNTV
541 VEATSQEDMV ERICIPDLIG DPDVPVALVK EPARTVKIHP LTHDFSSNQI KEALKFCRSN
601 ISKFTLGSSR TDAFVEFETE DGKERALAEH SISICNTQLF ISRIDIPRTI VARISNLSKS
661 AMRDVRALCV PYGQIRGVYI RGTGVADVFF DISEWPNMLA ILNSMNGMEI DGKKLVVRPA
721 TTVIPPEILR VLWKDPREKR YVKSVIQNLV REIEQPLDAT RCHTLITELL L
//