LOCUS AEE76712.1 881 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana CRM family member 3A protein.
ACCESSION CP002686-4299
PROTEIN_ID AEE76712.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CFM3A"
/locus_tag="AT3G23070"
/gene_synonym="ATCFM3A"
/gene_synonym="CRM family member 3A"
/inference="Similar to RNA sequence,
EST:INSD:BP575753.1,INSD:EG491203.1,INSD:ES066409.1,
INSD:EL072300.1,INSD:ES127699.1,INSD:BP588578.1,
INSD:EL089866.1,INSD:BP575682.1,INSD:EH927000.1,
INSD:AV826781.1,INSD:BP665113.1,INSD:BP665911.1,
INSD:BP575782.1,INSD:AV796247.1,INSD:AV793979.1,
INSD:EL100178.1,INSD:ES079255.1,INSD:EL131052.1"
/note="CRM family member 3A (CFM3A); FUNCTIONS IN: RNA
binding; INVOLVED IN: seed development, Group II intron
splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: RNA-binding, CRM domain
(InterPro:IPR001890); BEST Arabidopsis thaliana protein
match is: CRM family member 3B (TAIR:AT4G14510.1); Has 676
Blast hits to 606 proteins in 108 species: Archae - 3;
Bacteria - 41; Metazoa - 114; Fungi - 55; Plants - 403;
Viruses - 3; Other Eukaryotes - 57 (source: NCBI BLink)."
/db_xref="TAIR:AT3G23070"
/db_xref="Araport:AT3G23070"
intron_pos 286:0 (1/8)
intron_pos 445:1 (2/8)
intron_pos 489:0 (3/8)
intron_pos 608:0 (4/8)
intron_pos 660:1 (5/8)
intron_pos 758:0 (6/8)
intron_pos 778:0 (7/8)
intron_pos 808:0 (8/8)
BEGIN
1 MAMKPSLHFC PTTVTKKFVY SFQSSFCFRF LRYSSSISLG SCKGVTFSSR NDQIASRRFS
61 FSRDCNNGVW LENWNRIQKR NQPKPPKVVV NYRKEGRFSG SEIVSGDDNR SRDGDGSTME
121 KIVEKLKKYG YMEEVQNKEI EQERRIEKGS VEDIFYVEEG KLPNTRGGFT EESLLGGENV
181 IGSNGDVGFP WEKMSAKEKK ELEAEWTAKK ENRYSLAEMT LPESELRRLR NLTFRTASKM
241 RIRGGGVTQV AVDAIKEKWK SAEIVRLKIE GASALNMRKM HEILEKKTGG LVIWRSGTSI
301 SLYRGVSYEL PSGKWNKQRR EETPPEAVIE NHDETTTMVD KSDEKVHLPQ LEQETTSVEK
361 KDQTSPVVEY EDELDELLDD LGPRFMDWPG DNPLPVDADL LPGAIPDYEP PFRVLPYGVR
421 SSLGPKEATA LRRLARSIPP HFALGRSRQL QGLATAMVRL WEKSMLAKIA IKRGVQSTTS
481 ERMAEDLKKL TGGIMLSRNK DFLVFYRGKN FLSREVADAL VEQERFVRTL QDEEEQARLR
541 GSSALIVPST EPANKLVSAG TLGETLDATG KWGKNLDDDD HSDEVKQEVE ILRHENLVRK
601 LERKLAFAER KLLKAERGLA KVEVCLKPAE QREDPESITD EERFMFRKLG LKMKAFLLLG
661 RRGVFDGTVE NMHLHWKYRE LVKIIVKAKT FDGVKKVALA LEAESGGILV SIDKVTKGYA
721 IIVYRGQDYK RPTMLRPKNL LTKRKALARS IELQRREGLL KHISTMQAKA KQLRAEIEQM
781 EKVTDKGDEE LYNKLDMAYA SSDEETDEED DDDAFPETYA EGEDGEEGEI LAGELSETED
841 KDLDSNESET GFGDDSVLFA EDLHTKSEDL PNKKVRLQHQ S
//