LOCUS AEE76664.1 163 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-DIRECTED DNA METHYLATION 1 protein.
ACCESSION CP002686-4236
PROTEIN_ID AEE76664.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RDM1"
/locus_tag="AT3G22680"
/gene_synonym="RNA-DIRECTED DNA METHYLATION 1"
/inference="Similar to RNA sequence,
EST:INSD:EL154592.1,INSD:Z24495.1,INSD:DR212494.1,
INSD:ES026126.1,INSD:DR370148.1,INSD:EH937328.1,
INSD:EH922491.1,INSD:BP654293.1,INSD:EL015245.1,
INSD:EH935803.1,INSD:DR212496.1,INSD:ES064598.1,
INSD:DR212497.1,INSD:DR212493.1,INSD:ES173237.1,
INSD:BP834340.1,INSD:DR212495.1,INSD:AU235572.1,
INSD:BX838351.1,INSD:AU226300.1,INSD:EL035683.1,
INSD:AV557685.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824560.1,INSD:BX825136.1,INSD:BX825790.1,
INSD:BX825543.1,INSD:BT012098.1,INSD:AK227635.1,
INSD:BT006390.1"
/note="RNA-DIRECTED DNA METHYLATION 1 (RDM1); CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1950
(InterPro:IPR015270); Has 26 Blast hits to 26 proteins in
8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G22680"
/db_xref="Araport:AT3G22680"
intron_pos 42:1 (1/1)
BEGIN
1 MQSSMTMELR PSGDSGSSDV DAEISDGFSP LDTSHRDVAD EGSLLRRAEM YQDYMKQVPI
61 PTNRGSLIPF TSWVGLSISM KQLYGQPLHY LTNVLLQRWD QSRFGTDSEE QRLDSIIHPT
121 KAEATIWLVE EIHRLTPSHL HMALLWRSDP MYHSFIDPIF PEK
//