LOCUS AEE76659.1 204 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 20S proteasome beta subunit D1 protein.
ACCESSION CP002686-4230
PROTEIN_ID AEE76659.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PBD1"
/locus_tag="AT3G22630"
/gene_synonym="20S proteasome beta subunit D1"
/gene_synonym="BETA SUBUNIT"
/gene_synonym="MULTICATALYTIC ENDOPEPTIDASE COMPLEX"
/gene_synonym="PRCGB"
/gene_synonym="PROTEASOME COMPONENT"
/inference="Similar to RNA sequence,
EST:INSD:AV544000.1,INSD:BP793715.1,INSD:EL014394.1,
INSD:CD529530.1,INSD:CF651877.1,INSD:EL134480.1,
INSD:ES178183.1,INSD:BP599765.1,INSD:AV782164.1,
INSD:ES004094.1,INSD:EL257211.1,INSD:BP863407.1,
INSD:EL326215.1,INSD:N65657.1,INSD:EL127618.1,
INSD:DR322306.1,INSD:ES159703.1,INSD:EH906899.1,
INSD:ES181300.1,INSD:AV788045.1,INSD:EL973246.1,
INSD:EL007405.1,INSD:EG472054.1,INSD:BP626673.1,
INSD:ES112377.1,INSD:T44784.1,INSD:ES064912.1,
INSD:BP838270.1,INSD:BP653401.1,INSD:EH838079.1,
INSD:EH897837.1,INSD:DR322303.1,INSD:ES047193.1,
INSD:BP613353.1,INSD:EL078110.1,INSD:BP612849.1,
INSD:DR322304.1,INSD:BE526071.1,INSD:EL069782.1,
INSD:EL031862.1,INSD:EL975755.1,INSD:EG520445.1,
INSD:EH985621.1,INSD:ES180139.1,INSD:EL152752.1,
INSD:EL144462.1,INSD:EL053813.1,INSD:BP570334.1,
INSD:ES093181.1,INSD:ES109298.1,INSD:BP868022.2,
INSD:DR322302.1,INSD:EL133569.1,INSD:EL282431.1,
INSD:ES055423.1,INSD:EH922860.1,INSD:AV824841.1,
INSD:BP569408.1,INSD:EL040468.1,INSD:ES070363.1,
INSD:DR322305.1,INSD:EG472009.1,INSD:EG520446.1,
INSD:EH901814.1,INSD:ES116464.1,INSD:AV790567.1,
INSD:EH900808.1,INSD:Y09361.1,INSD:ES125253.1,
INSD:EH817448.1,INSD:EL154374.1,INSD:ES014911.1,
INSD:ES153587.1,INSD:EL012458.1,INSD:DR322301.1,
INSD:BP619772.1,INSD:EH851341.1,INSD:DR372288.1,
INSD:BP627378.1,INSD:BP576471.1,INSD:EL245697.1,
INSD:EL170951.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY143817.1,INSD:Y13692.1,INSD:AY052249.1,
INSD:BX826068.1,INSD:AK175702.1,INSD:AF043534.1"
/note="20S proteasome beta subunit D1 (PBD1); FUNCTIONS
IN: peptidase activity, endopeptidase activity,
threonine-type endopeptidase activity; INVOLVED IN:
ubiquitin-dependent protein catabolic process; LOCATED IN:
proteasome core complex, proteasome complex, apoplast,
plasma membrane, vacuole; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Proteasome, beta-type subunit,
conserved site (InterPro:IPR016050), Proteasome, subunit
alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana
protein match is: 20S proteasome beta subunit D2
(TAIR:AT4G14800.1); Has 4110 Blast hits to 4110 proteins
in 452 species: Archae - 623; Bacteria - 60; Metazoa -
1340; Fungi - 964; Plants - 536; Viruses - 0; Other
Eukaryotes - 587 (source: NCBI BLink)."
/db_xref="TAIR:AT3G22630"
/db_xref="Araport:AT3G22630"
intron_pos 53:2 (1/2)
intron_pos 95:0 (2/2)
BEGIN
1 MECVFGLVGN GFAIVAADTS AVHSILLHKN NEDKIMVLDS HKLVAASGEP GDRVQFTEYV
61 QKNVSLYKFR NGIPLTTAAA ANFTRGELAT ALRKNPYSVN ILMAGYDDES GASLYYIDYI
121 ATLHKVDKGA FGYGSYFSLS TMDRHYRSDM SVEEAIELVD KCILEIRSRL VVAPPNFVIK
181 IVDKDGARDY AWRQSVKDVT TAVV
//