LOCUS AEE76638.1 510 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA recognition motif XS domain protein
protein.
ACCESSION CP002686-4203
PROTEIN_ID AEE76638.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G22430"
/gene_synonym="MCB17.18"
/inference="Similar to RNA sequence,
EST:INSD:EG431212.1,INSD:EG431213.1,INSD:EG431211.1,
INSD:EG431216.1,INSD:EG431159.1,INSD:EG431150.1,
INSD:EG431157.1,INSD:EG431210.1,INSD:EG431149.1,
INSD:EG431228.1,INSD:EG431158.1,INSD:EG431148.1,
INSD:BX838132.1,INSD:EG431227.1,INSD:EG430067.1,
INSD:EG431215.1,INSD:ES013515.1,INSD:EG431214.1,
INSD:EG475154.1,INSD:EG431217.1,INSD:EG430066.1,
INSD:EG431147.1"
/note="CONTAINS InterPro DOMAIN/s: Domain of unknown
function XS (InterPro:IPR005380); BEST Arabidopsis
thaliana protein match is: XS domain-containing protein /
XS zinc finger domain-containing protein-related
(TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in
121 species: Archae - 2; Bacteria - 90; Metazoa - 191;
Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes -
195 (source: NCBI BLink)."
/db_xref="TAIR:AT3G22430"
/db_xref="Araport:AT3G22430"
intron_pos 290:2 (1/2)
intron_pos 393:1 (2/2)
BEGIN
1 MVGSNNNAKS STNKPPATSI PTAAASSSQN HKPRVNSTNN DGGISNNNNN NKKESKPMMI
61 GVQKTADKKP LKPNPSPKLA PIPKQSNPNH QNQTGPSSSR PMAPFPFPDS SPALGPPPQP
121 TYGFHMLERR TIVLADGSVR SYFALPPNYM DFPPQSRLAG PVFGRFPPFY PEEFRDQRMK
181 RKYPGEEEID RRDERAEMMR QRQQFMQYAN PNDHSFMAGT SRDVGEDVRA AKHMRVGSSR
241 HDNGGFQVDQ VALKKSFLGF VKRVFEDPME KKNYLENGRK GRLQCLVCGR SSKDVQDTHS
301 LVMHTYCSDD SSSRVHHLGL HKALCVLMGW NFSKAPDNSK AYQNLPADEA AINQAQLIIW
361 PPHVIVQNTS TGKGKEGRME GFGNKTMDNR IRELGLTGGK SKSLYGREGH LGITLFKFAG
421 DDSGLRDAMR MAEYFEKINR GRKSWGRVQP LTPSKDDEKN PGLVEVDGRT GEKKRIFYGY
481 LATVTDLDKV DVETKKKTTI ESLRELTRTK
//