LOCUS AEE76602.1 504 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein protein.
ACCESSION CP002686-4153
PROTEIN_ID AEE76602.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="POP2"
/locus_tag="AT3G22200"
/gene_synonym="GABA-T"
/gene_synonym="GAMMA-AMINOBUTYRATE TRANSAMINASE"
/gene_synonym="HER1"
/gene_synonym="HEXENAL RESPONSE1"
/gene_synonym="POLLEN-PISTIL INCOMPATIBILITY 2"
/inference="Similar to RNA sequence,
EST:INSD:BP840516.1,INSD:BP617557.1,INSD:EH994198.1,
INSD:DR302598.1,INSD:BP598712.1,INSD:DR302604.1,
INSD:DR370667.1,INSD:AV536355.1,INSD:BP857042.1,
INSD:AV819099.1,INSD:BP806035.1,INSD:BP614349.1,
INSD:BP632858.1,INSD:BP561144.1,INSD:AV816895.1,
INSD:DR302610.1,INSD:EH963530.1,INSD:DR279612.1,
INSD:DR279607.1,INSD:CB258554.1,INSD:BP606824.1,
INSD:DR302607.1,INSD:BP858163.1,INSD:BP779524.1,
INSD:BP604317.1,INSD:BP793333.1,INSD:AU230518.1,
INSD:BP602631.1,INSD:EG501243.1,INSD:BP565172.1,
INSD:BP788337.1,INSD:CB259101.1,INSD:EL288088.1,
INSD:EL278358.1,INSD:EL337262.1,INSD:BP612168.1,
INSD:BP806413.1,INSD:AV819681.1,INSD:DR302608.1,
INSD:EL140997.1,INSD:EL008313.1,INSD:EL329375.1,
INSD:BP569165.1,INSD:AV567431.1,INSD:AV811028.1,
INSD:EG497807.1,INSD:DR279614.1,INSD:CD532534.1,
INSD:AV792103.1,INSD:EH915961.1,INSD:BP659247.1,
INSD:DR302609.1,INSD:BP848385.1,INSD:AA395153.1,
INSD:BP804894.1,INSD:EL311360.1,INSD:BX838309.1,
INSD:EL092056.1,INSD:BP611657.1,INSD:DR302602.1,
INSD:ES138632.1,INSD:DR302600.1,INSD:EG456542.1,
INSD:ES193903.1,INSD:ES166426.1,INSD:BP662231.1,
INSD:BP619087.1,INSD:AA650910.1,INSD:DR279613.1,
INSD:EL296189.1,INSD:BP862196.1,INSD:DR302605.1,
INSD:EL259709.1,INSD:CB252819.1,INSD:EG438864.1,
INSD:BP567635.1,INSD:EL057279.1,INSD:BP862549.1,
INSD:BP598103.1,INSD:EL323849.1,INSD:EL126270.1,
INSD:BP655191.1,INSD:BP616168.1,INSD:AV803462.1,
INSD:AV821586.1,INSD:DR279606.1,INSD:ES150679.1,
INSD:DR279609.1,INSD:ES015887.1,INSD:BP589752.1,
INSD:EL993056.1,INSD:DR370453.1,INSD:BP573581.1,
INSD:AV785142.1,INSD:DR279610.1,INSD:ES206844.1,
INSD:BP615723.1,INSD:EH971339.1,INSD:CD532003.1,
INSD:BP611285.1,INSD:ES073190.1,INSD:DR279608.1,
INSD:BP607408.1,INSD:EL222475.1,INSD:DR302611.1,
INSD:AV782090.1,INSD:BP619815.1,INSD:CB185490.1,
INSD:BP618189.1,INSD:DR302606.1,INSD:EH868460.1,
INSD:AV804206.1,INSD:ES198592.1,INSD:DR279615.1,
INSD:EL112990.1,INSD:BP830214.1,INSD:EG501244.1,
INSD:EH919113.1,INSD:BP665600.1,INSD:ES138265.1,
INSD:AV543190.1,INSD:DR302601.1,INSD:DR302599.1,
INSD:EG456540.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY034923.1,INSD:AF351125.1,INSD:BX825946.1,
INSD:AY142571.1,INSD:BX823758.1"
/note="POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); FUNCTIONS
IN: 4-aminobutyrate:pyruvate transaminase activity, cobalt
ion binding, 4-aminobutyrate transaminase activity, zinc
ion binding; INVOLVED IN: in 11 processes; LOCATED IN:
mitochondrion, plasma membrane; EXPRESSED IN: 28 plant
structures; EXPRESSED DURING: 16 growth stages; CONTAINS
InterPro DOMAIN/s: Pyridoxal phosphate-dependent
transferase, major domain (InterPro:IPR015424),
Aminotransferase class-III (InterPro:IPR005814), Pyridoxal
phosphate-dependent transferase, major region, subdomain 1
(InterPro:IPR015421); BEST Arabidopsis thaliana protein
match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has
35485 Blast hits to 35478 proteins in 2746 species: Archae
- 740; Bacteria - 23053; Metazoa - 633; Fungi - 902;
Plants - 413; Viruses - 17; Other Eukaryotes - 9727
(source: NCBI BLink)."
/db_xref="TAIR:AT3G22200"
/db_xref="Araport:AT3G22200"
intron_pos 16:0 (1/18)
intron_pos 49:2 (2/18)
intron_pos 78:0 (3/18)
intron_pos 102:1 (4/18)
intron_pos 135:0 (5/18)
intron_pos 166:0 (6/18)
intron_pos 190:2 (7/18)
intron_pos 203:2 (8/18)
intron_pos 233:1 (9/18)
intron_pos 259:0 (10/18)
intron_pos 284:0 (11/18)
intron_pos 300:0 (12/18)
intron_pos 328:0 (13/18)
intron_pos 357:1 (14/18)
intron_pos 383:2 (15/18)
intron_pos 415:0 (16/18)
intron_pos 441:1 (17/18)
intron_pos 480:0 (18/18)
BEGIN
1 MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT
61 AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA LGGNEPRLVS AAVEQLNTLP
121 FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE
181 KKKFIARKKS YHGSTLISAS LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS
241 TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301 ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS
361 HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD GVKAFASGSP IIGETRGTGL
421 ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL
481 ISIYGKALKA TEEKVKELKA QHKK
//