LOCUS AEE76590.1 506 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Phototropic-responsive NPH3 family
protein protein.
ACCESSION CP002686-4129
PROTEIN_ID AEE76590.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G22104"
/inference="Similar to RNA sequence,
EST:INSD:DR232953.1,INSD:DR383348.1,INSD:DR367165.1,
INSD:EH894516.1,INSD:EL336388.1,INSD:EL973324.1,
INSD:DR367167.1,INSD:DR232949.1,INSD:DR232952.1,
INSD:EG458932.1,INSD:BP794845.1,INSD:DR367162.1,
INSD:EL194185.1,INSD:BP793966.1,INSD:DR367163.1,
INSD:AV827631.1,INSD:EL319970.1,INSD:DR232957.1,
INSD:EL122626.1,INSD:DR367164.1,INSD:DR367166.1,
INSD:DR232956.1,INSD:EH934776.1,INSD:T42197.1,
INSD:DR232960.1,INSD:DR232958.1,INSD:EL065463.1,
INSD:EH923357.1,INSD:DR232950.1,INSD:EH984497.1,
INSD:EL314187.1,INSD:EH807555.1,INSD:EH815046.1,
INSD:EL128066.1,INSD:DR232946.1,INSD:DR232951.1,
INSD:DR367169.1,INSD:DR232961.1,INSD:EL102758.1,
INSD:DR232959.1,INSD:AV798826.1,INSD:AV816427.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF360210.1,INSD:AY040058.1,INSD:BX842375.1"
/note="Phototropic-responsive NPH3 family protein;
FUNCTIONS IN: signal transducer activity; INVOLVED IN:
response to light stimulus; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold
(InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210);
BEST Arabidopsis thaliana protein match is:
Phototropic-responsive NPH3 family protein
(TAIR:AT3G19850.1); Has 844 Blast hits to 828 proteins in
39 species: Archae - 0; Bacteria - 4; Metazoa - 27; Fungi
- 3; Plants - 786; Viruses - 0; Other Eukaryotes - 24
(source: NCBI BLink)."
/db_xref="TAIR:AT3G22104"
/db_xref="Araport:AT3G22104"
intron_pos 23:0 (1/2)
intron_pos 385:0 (2/2)
BEGIN
1 MEACCSDLEV DINGEQTIFL NKQIICAYSG TLRKLLGKST SSSGNLKVIF NDFPGGAESF
61 EFVSRFCYND GRVAVMPSNV VFLHCAAKFM EVTKVLEQTE KCMEEIRYWA WPEVLLCLKQ
121 CQEVETSPEV DSLAAKLMDA LVEKLCLTIE MSPSSAGSAC SPDSSLFRFS CDSKSTESFK
181 NCSVRLTWWF DEVLVLSSGL VEMFLKLMVL RKFDNLIISR FLFYYQKVKF CSASSHEKRK
241 ILETIIDTLC VLDRSCVPCK SLFAVLRLAL GLNINKSCMN KLEVMIGHQL DQATLDNLLV
301 PSPSKSSHLY YVNLVLRFTK AFLDGARSGL QLKKVSSLID QYIAEVAPDP CLKPSKFLSL
361 ITLVPDSARE SHEDIYRAID MYLEAHTGTT DGEKLNLIRT LSYEKLSGES RAHISRNQKF
421 QAIETLDEQQ QQQQQQQQQK QLILRMEKVE TSGENEKLKE HIEGIQWRVM ELERACLKMQ
481 NQMEVIKKRS KSSSKGSNRS LPKLCS
//