LOCUS AEE76554.1 437 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc finger C-x8-C-x5-C-x3-H type
family protein protein.
ACCESSION CP002686-4084
PROTEIN_ID AEE76554.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G21810"
/inference="Similar to RNA sequence,
EST:INSD:BP610473.1,INSD:AV795931.1,INSD:BP608064.1,
INSD:ES207041.1,INSD:ES196524.1,INSD:ES140263.1,
INSD:AI995591.1,INSD:T45909.1,INSD:BP603671.1,
INSD:AV801140.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY128791.1,INSD:AY059899.1"
/note="Zinc finger C-x8-C-x5-C-x3-H type family protein;
FUNCTIONS IN: zinc ion binding, nucleic acid binding;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, CCCH-type
(InterPro:IPR000571); Has 904 Blast hits to 850 proteins
in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431;
Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes -
285 (source: NCBI BLink)."
/db_xref="TAIR:AT3G21810"
/db_xref="Araport:AT3G21810"
intron_pos 45:1 (1/10)
intron_pos 93:1 (2/10)
intron_pos 104:2 (3/10)
intron_pos 152:0 (4/10)
intron_pos 171:0 (5/10)
intron_pos 203:2 (6/10)
intron_pos 227:2 (7/10)
intron_pos 303:1 (8/10)
intron_pos 370:0 (9/10)
intron_pos 416:0 (10/10)
BEGIN
1 MSGSSMYKTK LCILFNKTGD CSRPNCTFAH GNAELRRPGE SSFTGRRHNM DSDLRDRRHN
61 MDSDLRDRLG RQFSPERRPS LDRSGRRVQR FSGHDNSMPF ENRRDKDYRE NRRFDERRDY
121 AGGLKVGNRI EDRAEDGRNK FHGYNNVLEE QLKDVEMDVK MLTDDKLRLE ASVERKAHEV
181 DILTSRIQEL ETQLDREKDE CRRITSSSKK FVKEYNRFLR AQDDLKRSEA RLQKLGNQLS
241 TYLAGSEGNN RDVGLDIVSD EETNGRNLRT ACDPHNELQN TSSLSRKKHY VDQYTTKEPV
301 EDGLIGRGEE EKVENEKKRP PCWNMLSSKS YSEEESGAWN DEDTINRSSS KEDNWKRRRF
361 SIGTSATDKV ILSTSMAARE FDDVAESEEE NPEAANGSPL ISLPPPPPFR DAHVQRDEDD
421 VNGDVMEQKK AYDDDSV
//