LOCUS AEE76507.1 364 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein protein.
ACCESSION CP002686-4025
PROTEIN_ID AEE76507.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="LBO1"
/locus_tag="AT3G21420"
/gene_synonym="LATERAL BRANCHING OXIDOREDUCTASE 1"
/inference="Similar to RNA sequence,
EST:INSD:DR282100.1,INSD:BE524868.1,INSD:ES006380.1,
INSD:BP797887.1,INSD:ES002331.1,INSD:EL142354.1,
INSD:DR380063.1,INSD:EL276118.1,INSD:ES040918.1,
INSD:ES159978.1,INSD:DR282101.1,INSD:BP779484.1,
INSD:ES055525.1,INSD:AU226073.1,INSD:ES083266.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT005988.1,INSD:BX824519.1,INSD:AY084795.1,
INSD:AK227427.1"
/note="2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein; FUNCTIONS IN: oxidoreductase
activity; INVOLVED IN: metabolic process; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 16 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase
(InterPro:IPR005123); BEST Arabidopsis thaliana protein
match is: senescence-related gene 1 (TAIR:AT1G17020.1);
Has 8953 Blast hits to 8890 proteins in 1011 species:
Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056;
Plants - 5016; Viruses - 0; Other Eukaryotes - 1596
(source: NCBI BLink)."
/db_xref="TAIR:AT3G21420"
/db_xref="Araport:AT3G21420"
intron_pos 90:0 (1/3)
intron_pos 172:2 (2/3)
intron_pos 282:0 (3/3)
BEGIN
1 MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL
61 SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV EDIEEVASEF FDMPLEEKKK
121 YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK
181 EIRELCKRLL KYIAISLGLK EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA
241 LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301 KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA
361 KILN
//