LOCUS AEE76496.1 257 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA polymerase transcriptional regulation
mediator-like protein protein.
ACCESSION CP002686-4013
PROTEIN_ID AEE76496.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="MED6"
/locus_tag="AT3G21350"
/inference="Similar to RNA sequence,
EST:INSD:AV554508.1,INSD:EL040050.1,INSD:DR382506.1,
INSD:BP599281.1,INSD:ES142916.1,INSD:ES070405.1,
INSD:ES187026.1,INSD:ES026580.1,INSD:EH893480.1,
INSD:ES181658.1,INSD:AV545675.1,INSD:ES040070.1,
INSD:BP848225.1,INSD:AI997949.1,INSD:DR358434.1,
INSD:EL986837.1,INSD:ES186768.1,INSD:AV825034.1,
INSD:ES010492.1,INSD:EL307428.1,INSD:ES126076.1,
INSD:AV789444.1,INSD:DR369561.1,INSD:EL020006.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY070104.1,INSD:AY091238.1,INSD:BX823400.1"
/note="MED6; FUNCTIONS IN: RNA polymerase II transcription
mediator activity; INVOLVED IN: regulation of
transcription from RNA polymerase II promoter; LOCATED IN:
mediator complex; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mediator complex, subunit Med6, metazoa/plant
(InterPro:IPR016820), Mediator complex, subunit Med6
(InterPro:IPR007018); Has 344 Blast hits to 344 proteins
in 167 species: Archae - 0; Bacteria - 0; Metazoa - 146;
Fungi - 139; Plants - 37; Viruses - 0; Other Eukaryotes -
22 (source: NCBI BLink)."
/db_xref="TAIR:AT3G21350"
/db_xref="Araport:AT3G21350"
intron_pos 87:2 (1/4)
intron_pos 146:0 (2/4)
intron_pos 169:1 (3/4)
intron_pos 206:0 (4/4)
BEGIN
1 MDSSLLSAAT ADTFNGNAAD QIPPPLQPPG TDMTGISFRD QLWINSYPLD RNYIFDYFAL
61 SPFYDTTCNN EILRRRSIHP LDLSHLSKMT GLEYMLTDAT EPNLFVFRKQ KRDGPEKVTP
121 MLTYYILDGS IYQAPQLCSV FAARVSRTIY NISKAFTDAA SKLETIRQVD TENQNEPAES
181 KPASETVDLK EMKRVDVILT SLYRKLAPPP PPPPFPEGYV SQEALGEKEE LGTQGGESQP
241 PQVDPIIDQG PAKRMKF
//