LOCUS AEE76490.1 554 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA methyltransferase family protein protein.
ACCESSION CP002686-4004
PROTEIN_ID AEE76490.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G21300"
/inference="Similar to RNA sequence,
EST:INSD:EG494207.1,INSD:ES195303.1,INSD:EG494218.1,
INSD:BP787797.1,INSD:EL200671.1,INSD:EL220121.1,
INSD:BP791358.1,INSD:ES002213.1,INSD:EL016275.1,
INSD:AV803630.1,INSD:AV828967.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY080651.1,INSD:BX822639.1"
/note="RNA methyltransferase family protein; FUNCTIONS IN:
RNA binding, RNA methyltransferase activity; INVOLVED IN:
RNA processing; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), 23S rRNA methyltransferase/RumA
(InterPro:IPR001566), (Uracil-5)-methyltransferase
(InterPro:IPR010280), Deoxyribonuclease/rho motif-related
TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana
protein match is: zinc finger (CCCH-type) family protein
(TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins
in 2576 species: Archae - 226; Bacteria - 8529; Metazoa -
196; Fungi - 218; Plants - 136; Viruses - 7; Other
Eukaryotes - 1037 (source: NCBI BLink)."
/db_xref="TAIR:AT3G21300"
/db_xref="Araport:AT3G21300"
intron_pos 122:0 (1/9)
intron_pos 203:0 (2/9)
intron_pos 257:0 (3/9)
intron_pos 293:2 (4/9)
intron_pos 330:0 (5/9)
intron_pos 382:0 (6/9)
intron_pos 420:2 (7/9)
intron_pos 476:1 (8/9)
intron_pos 520:0 (9/9)
BEGIN
1 MLAATPAHGL RYVVVPTRSW LHRFRCCSSS LAPLSPSEFS GGNKAQKKLN DENNTNVSNE
61 KTAPYYPKRG ETVELVCESL GFKGKGICKV DGTGYVVMCD RALPGERFLG RVTRRKGSYA
121 EVTKMKTISP HKDLVEAPCE YASYCGGCKT QNLSYEAQLR AKEEQVHELI RHVGRFSDNN
181 PGLEIVLKPI VACDIQFHYR NKMEFSFGPQ RWLPIEMLNE RQDGPKNFAL GLHAPGFFDK
241 VLNVDKCLLQ SEPGNLVLAA VQDCWRDPEL SLSPYDCRSH VGFLKHLMLR TGRNVETGSL
301 ELMVNFVTSS YKPELLKPLV DRISSIPQVV SIMNNVNSSV GNTSVGEKEY TLYGKDTITE
361 VLRGLTFQIS ANSFFQTNTH QAEVLYKLIE ESAGLKGDGS EVVLDLFCGT GTIGLTLARR
421 AKHVYGYEVV PQAITDAHKN AQINGIENAT FIQGDLNKIG EDFGNNFPKP DIVISDPNRP
481 GMHMKLIKFL LKLKSPRIIY VSCNPATCAR DLDYLCHGVE EKNLKGCYKL MSVQPVDMFP
541 HTPHIECVCL LELA
//