LOCUS AEE76427.1 398 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein protein.
ACCESSION CP002686-3907
PROTEIN_ID AEE76427.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="JMJD5"
/locus_tag="AT3G20810"
/gene_synonym="JMJ30"
/gene_synonym="Jumonji C domain-containing protein 30"
/gene_synonym="jumonji domain containing 5"
/inference="Similar to RNA sequence,
EST:INSD:BP826584.1,INSD:EL034793.1,INSD:BE530059.1,
INSD:EH991264.1,INSD:ES041153.1,INSD:ES009149.1,
INSD:BP817512.1,INSD:ES158515.1,INSD:DR382096.1,
INSD:EH812540.1,INSD:BP833403.1,INSD:EL168571.1,
INSD:ES082272.1,INSD:EL138421.1,INSD:ES112760.1,
INSD:DR271386.1,INSD:EH876653.1,INSD:EL988578.1,
INSD:EL042369.1,INSD:EL180457.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX842159.1"
/note="2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein; CONTAINS InterPro DOMAIN/s:
Transcription factor jumonji/aspartyl beta-hydroxylase
(InterPro:IPR003347); BEST Arabidopsis thaliana protein
match is: 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein (TAIR:AT5G19840.2); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT3G20810"
/db_xref="Araport:AT3G20810"
intron_pos 163:0 (1/6)
intron_pos 233:0 (2/6)
intron_pos 278:0 (3/6)
intron_pos 326:0 (4/6)
intron_pos 357:0 (5/6)
intron_pos 397:2 (6/6)
BEGIN
1 MSGATTASSG DHNNLRLPTP TLDAESQTLL QSISAEGGYA YARMAVLAVA GDQSAAEAAR
61 DMAWEQLHSG PWHSVLPVWR DAYSMACLHV AKIHFAAGEF GEALGALDMG LIMGGMLLRK
121 DLHDSVLLVS SEARKMTKSL EEASGDFKGE RLVPEVPVDV NEVLKILPCR SLTCKRVEKR
181 SGLSLEGFLR DYYLPGTPVV ITNSMAHWPA RTKWNHLDYL NAVAGNRTVP VEVGKNYLCS
241 DWKQELVTFS KFLERMRTNK SSPMEPTYLA QHPLFDQINE LRDDICIPDY CFVGGGELQS
301 LNAWFGPAGT VTPLHHDPHH NILAQVVGKK YIRLYPSFLQ DELYPYSETM LCNSSQVDLD
361 NIDETEFPKA MELEFMDCIL EEGEMLYIPP KWWHYVRF
//