LOCUS AEE76418.1 369 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002686-3900
PROTEIN_ID AEE76418.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="FIE"
/locus_tag="AT3G20740"
/gene_synonym="FERTILIZATION-INDEPENDENT ENDOSPERM"
/gene_synonym="FERTILIZATION-INDEPENDENT ENDOSPERM 1"
/gene_synonym="FIE1"
/gene_synonym="FIS3"
/inference="Similar to RNA sequence,
EST:INSD:EL987699.1,INSD:BP805373.1,INSD:AU229002.1,
INSD:DR366397.1,INSD:EL291415.1,INSD:EL211183.1,
INSD:BP625970.1,INSD:EH871599.1,INSD:BP623531.1,
INSD:BP618373.1,INSD:BP634425.1,INSD:EL973248.1,
INSD:ES189478.1,INSD:F15578.1,INSD:AV525453.1,
INSD:AU237896.1,INSD:DR383889.1,INSD:BP807073.1,
INSD:EL122456.1,INSD:AV519989.1,INSD:EH970839.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK117114.1,INSD:BT005326.1,INSD:AF129516.1,
INSD:BX842554.1"
/note="FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); CONTAINS
InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782),
WD40 repeat, conserved site (InterPro:IPR019775), WD40
repeat (InterPro:IPR001680), G-protein beta WD-40 repeat,
region (InterPro:IPR020472), WD40 repeat-like-containing
domain (InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: structural molecules (TAIR:AT1G79990.1); Has
16392 Blast hits to 11301 proteins in 524 species: Archae
- 16; Bacteria - 2767; Metazoa - 5614; Fungi - 4038;
Plants - 1850; Viruses - 0; Other Eukaryotes - 2107
(source: NCBI BLink)."
/db_xref="TAIR:AT3G20740"
/db_xref="Araport:AT3G20740"
intron_pos 60:0 (1/12)
intron_pos 82:0 (2/12)
intron_pos 123:0 (3/12)
intron_pos 150:0 (4/12)
intron_pos 181:0 (5/12)
intron_pos 206:1 (6/12)
intron_pos 233:0 (7/12)
intron_pos 257:0 (8/12)
intron_pos 277:0 (9/12)
intron_pos 309:1 (10/12)
intron_pos 330:2 (11/12)
intron_pos 350:2 (12/12)
BEGIN
1 MSKITLGNES IVGSLTPSNK KSYKVTNRIQ EGKKPLYAVV FNFLDARFFD VFVTAGGNRI
61 TLYNCLGDGA ISALQSYADE DKEESFYTVS WACGVNGNPY VAAGGVKGII RVIDVNSETI
121 HKSLVGHGDS VNEIRTQPLK PQLVITASKD ESVRLWNVET GICILIFAGA GGHRYEVLSV
181 DFHPSDIYRF ASCGMDTTIK IWSMKEFWTY VEKSFTWTDD PSKFPTKFVQ FPVFTASIHT
241 NYVDCNRWFG DFILSKSVDN EILLWEPQLK ENSPGEGASD VLLRYPVPMC DIWFIKFSCD
301 LHLSSVAIGN QEGKVYVWDL KSCPPVLITK LSHNQSKSVI RQTAMSVDGS TILACCEDGT
361 IWRWDVITK
//