LOCUS AEE76417.2 565 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PPR superfamily protein protein.
ACCESSION CP002686-3899
PROTEIN_ID AEE76417.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G20730"
/inference="Similar to RNA sequence,
EST:INSD:EL987699.1,INSD:EL291415.1,INSD:BP634425.1,
INSD:EL973248.1,INSD:ES189478.1,INSD:BP858193.1,
INSD:EL211183.1,INSD:ES023287.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK176813.1,INSD:BT010745.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Tetratricopeptide-like helical (InterPro:IPR011990),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1);
Has 41688 Blast hits to 13542 proteins in 246 species:
Archae - 0; Bacteria - 10; Metazoa - 149; Fungi - 146;
Plants - 40815; Viruses - 0; Other Eukaryotes - 568
(source: NCBI BLink)."
/db_xref="TAIR:AT3G20730"
/db_xref="Araport:AT3G20730"
intron_pos 210:1 (1/1)
BEGIN
1 MMLVVSENYL LSPSLYLKAL KLCSYQNVKK QLLLIHGNSI TNGFCSNLQL KDMLIDLYLK
61 QGDVKHARKL FDRISKRDVV SWTAMISRFS RCGYHPDALL LFKEMHREDV KANQFTYGSV
121 LKSCKDLGCL KEGMQIHGSV EKGNCAGNLI VRSALLSLYA RCGKMEEARL QFDSMKERDL
181 VSWNAMIDGY TANACADTSF SLFQLMLTEG KKPDCFTFGS LLRASIVVKC LEIVSELHGL
241 AIKLGFGRSS ALIRSLVNAY VKCGSLANAW KLHEGTKKRD LLSCTALITG FSQQNNCTSD
301 AFDIFKDMIR MKTKMDEVVV SSMLKICTTI ASVTIGRQIH GFALKSSQIR FDVALGNSLI
361 DMYAKSGEIE DAVLAFEEMK EKDVRSWTSL IAGYGRHGNF EKAIDLYNRM EHERIKPNDV
421 TFLSLLSACS HTGQTELGWK IYDTMINKHG IEAREEHLSC IIDMLARSGY LEEAYALIRS
481 KEGIVSLSSS TWGAFLDACR RHGNVQLSKV AATQLLSMEP RKPVNYINLA SVYAANGAWD
541 NALNTRKLMK ESGSCNKAPG YSLVY
//