LOCUS AEE76409.1 526 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana organic cation/carnitine transporter4 protein.
ACCESSION CP002686-3891
PROTEIN_ID AEE76409.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="OCT4"
/locus_tag="AT3G20660"
/gene_synonym="AtOCT4"
/gene_synonym="organic cation/carnitine transporter4"
/inference="Similar to RNA sequence,
EST:INSD:ES043153.1,INSD:ES196446.1,INSD:ES070847.1,
INSD:BX836099.1,INSD:EH915684.1,INSD:EH909504.1,
INSD:EH810498.1,INSD:EL303756.1,INSD:EL184725.1,
INSD:EL268371.1,INSD:EL083700.1,INSD:ES168133.1,
INSD:ES066742.1,INSD:BP808271.1,INSD:EL018737.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK176424.1,INSD:BT010744.1"
/note="organic cation/carnitine transporter4 (4-Oct);
FUNCTIONS IN: carbohydrate transmembrane transporter
activity, sugar:hydrogen symporter activity; INVOLVED IN:
transport, transmembrane transport; LOCATED IN:
chloroplast thylakoid membrane, membrane; EXPRESSED IN: 13
plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved
site (InterPro:IPR005829), Major facilitator superfamily
(InterPro:IPR020846), General substrate transporter
(InterPro:IPR005828), Major facilitator superfamily,
general substrate transporter (InterPro:IPR016196); BEST
Arabidopsis thaliana protein match is: pseudogene
(TAIR:AT1G73220.1); Has 27723 Blast hits to 27519 proteins
in 2032 species: Archae - 544; Bacteria - 15020; Metazoa -
4940; Fungi - 4480; Plants - 1745; Viruses - 0; Other
Eukaryotes - 994 (source: NCBI BLink)."
/db_xref="TAIR:AT3G20660"
/db_xref="Araport:AT3G20660"
intron_pos 138:1 (1/1)
BEGIN
1 MESPEDRNGN DVRQPLLEKI PVKKEAEGEE RLCIDEMLQR YCGEFGRWQL KHFVLTCIAW
61 ALEAFHTMVM IFADQEPEWR CVGSDCRVGS LNCELDPSSW EWTAGKGSST VSEWGLICGD
121 KYKVGLVQAL FFAGCMIGAG VFGHLSDSKL GRKGSLTVVC IINAIFGIAT AFSPNYWTYV
181 VLRFLTGFST GGVGLTAFVL ATEPIGPSKR GVAGMSTFYF FSAGIAVLSG IAYVFRSWRE
241 LFIVSSLPSL LFLLIVIPFI SESPRWYLVR GKVDEAMKLM HSIAKTNGRH IPAGVTLALD
301 DDVENNNGER NTAVEGSLKD VILSPLMRMR LVISVAISFT VSIVYYGLSL NVGNLKTNLY
361 LNVFVNAVSE MPAFAITAVL LDKYGRKPLS IGTQWFSCVF CLVGFSVWGA GPWKSVRMVS
421 GVLGIFGMAG TYNLLFIYIA ELFPTVVRNA ALGCATQAAQ MGAILAPFVV VLGEELPFGV
481 FAVCGLVGGG LAFYLPETLN KPLYDTMFGM HEAESESNRE RGEVIC
//