LOCUS AEE76390.1 729 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SHV3-like 3 protein.
ACCESSION CP002686-3866
PROTEIN_ID AEE76390.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SVL3"
/locus_tag="AT3G20520"
/gene_synonym="GDPDL5"
/gene_synonym="Glycerophosphodiester phosphodiesterase
(GDPD) like 5"
/gene_synonym="SHV3-like 3"
/inference="Similar to RNA sequence,
EST:INSD:AU227512.1,INSD:ES077469.1,INSD:ES061161.1,
INSD:ES070813.1,INSD:ES057094.1,INSD:ES173625.1,
INSD:ES069911.1,INSD:ES068678.1,INSD:ES141761.1,
INSD:ES155783.1,INSD:AU236560.1,INSD:EL980235.1,
INSD:ES179225.1,INSD:ES174469.1,INSD:ES019378.1,
INSD:AV563138.1,INSD:AV556555.1,INSD:ES206679.1,
INSD:ES015079.1,INSD:ES197103.1,INSD:ES172834.1,
INSD:ES033726.1,INSD:ES006830.1,INSD:ES087388.1,
INSD:ES084891.1,INSD:ES029049.1,INSD:ES157279.1,
INSD:ES176250.1,INSD:ES203972.1,INSD:ES131514.1,
INSD:ES014782.1,INSD:ES214423.1,INSD:BP641634.1,
INSD:ES042877.1,INSD:ES029027.1,INSD:ES096621.1,
INSD:ES004578.1,INSD:EL968406.1,INSD:ES086491.1,
INSD:ES098732.1,INSD:ES049150.1,INSD:ES024741.1,
INSD:AV566652.1,INSD:EL978585.1,INSD:ES112065.1,
INSD:ES060281.1,INSD:ES201604.1,INSD:AV559031.1,
INSD:ES213880.1,INSD:ES161818.1,INSD:BP817137.1,
INSD:ES177114.1,INSD:ES025176.1,INSD:ES024581.1,
INSD:ES112339.1,INSD:ES011584.1,INSD:ES196237.1,
INSD:ES198085.1,INSD:AV559337.1,INSD:ES106012.1,
INSD:ES109543.1,INSD:ES155374.1,INSD:ES003741.1,
INSD:AV564260.1,INSD:BP840304.1,INSD:ES180931.1,
INSD:ES208111.1,INSD:ES001886.1,INSD:BP597740.1,
INSD:ES119458.1,INSD:ES059958.1,INSD:ES004970.1,
INSD:BP597197.1,INSD:BE529823.1,INSD:EL975190.1,
INSD:ES082137.1,INSD:ES171250.1,INSD:ES151062.1,
INSD:ES159391.1,INSD:ES046578.1,INSD:ES093642.1,
INSD:ES074112.1,INSD:EL976111.1,INSD:ES190226.1,
INSD:ES058213.1,INSD:ES090562.1,INSD:ES011382.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT004193.1,INSD:AK220802.1,INSD:BX822441.1"
/note="SHV3-like 3 (SVL3); FUNCTIONS IN: phosphoric
diester hydrolase activity, glycerophosphodiester
phosphodiesterase activity; INVOLVED IN: glycerol
metabolic process, lipid metabolic process; LOCATED IN:
anchored to membrane; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 4 anthesis, C globular stage, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: PLC-like phosphodiesterase, TIM
beta/alpha-barrel domain (InterPro:IPR017946),
Glycerophosphoryl diester phosphodiesterase
(InterPro:IPR004129); BEST Arabidopsis thaliana protein
match is: PLC-like phosphodiesterase family protein
(TAIR:AT4G26690.1); Has 1100 Blast hits to 834 proteins in
287 species: Archae - 0; Bacteria - 734; Metazoa - 17;
Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes -
41 (source: NCBI BLink)."
/db_xref="TAIR:AT3G20520"
/db_xref="Araport:AT3G20520"
intron_pos 30:1 (1/8)
intron_pos 117:1 (2/8)
intron_pos 154:0 (3/8)
intron_pos 321:1 (4/8)
intron_pos 335:1 (5/8)
intron_pos 431:1 (6/8)
intron_pos 479:0 (7/8)
intron_pos 646:1 (8/8)
BEGIN
1 MACPRVIFLI LITFFILQTA FSSSWQTLSG KPPAVIARGG FSGMFPDSSI QAYQLVNITT
61 SPDVMLWCDL QLTKDGVGIC FPNLKLDNGS NVIRIDPHYK ERFSVDFTWK ELSDVKLAQG
121 VVSRPYIFDD VSSILAIEEV AKLTASGLWL NIQDSAFYAK HNLSMRNSVV SLSRRLKVNF
181 ISSPGISFLK SMKNSVKPTV TKLIFRFLKQ EHIEPFTNQS YGSLAKNLSY IRTFSSGILV
241 PKSYIWPVDS ALYLQPHTSL VTDAHKEGLQ VFASEFANDF VIAYNYSYDP TAEYLSFIDN
301 GNFSVDGFLS DFPVTPYRAI NCFSHVDPKR AKEQAKITII SKNGASGDFP GCTDLAYQRA
361 ASDGADILDC NVQMSKDKIP FCMSSFDLIN STNVIETSFR NLSSVVSEIN PRRSGIYTFS
421 LTMSQIQTLK PTISNLEKDS GLFRNPRNNK AGKFLTLSEF LFLPNRYSSL LGLLIEVENA
481 AYLVEHQGIS VVDAVLDELK RATTQQNKTS ARTILIQSTD KSVLMKFKEK NKMNHDELVY
541 RVDDNIRDVA DSAIKDIKNF AGSIVISKKS VFPYKGFIIL EKETNIASKL KSNGLRVYVE
601 RFSNECVTHA FDFYDDPTLE IDSFVRDVQI DGIITDFPAT TARYRKNKCY GEFGLTTTGE
661 LITFANPMLL PPAEAPYPAL LDSDVTEPPL PEARSQPPAS SPSKAEEKAI EVPFAFIAMA
721 ILVCFFISV
//