LOCUS AEE76379.1 899 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Alpha amylase family protein protein.
ACCESSION CP002686-3850
PROTEIN_ID AEE76379.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EMB2729"
/locus_tag="AT3G20440"
/gene_synonym="BE1"
/gene_synonym="BRANCHING ENZYME 1"
/gene_synonym="EMBRYO DEFECTIVE 2729"
/inference="Similar to RNA sequence,
EST:INSD:ES177632.1,INSD:AV547019.1,INSD:ES093857.1,
INSD:EG450153.1,INSD:AU239658.1,INSD:EG450130.1,
INSD:ES018521.1,INSD:ES085678.1,INSD:EL980892.1,
INSD:AU230992.1,INSD:ES068356.1,INSD:BP868171.1,
INSD:ES167674.1"
/note="EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN:
cation binding, catalytic activity, alpha-amylase
activity; INVOLVED IN: post-embryonic development,
carbohydrate metabolic process, embryo development ending
in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 16
plant structures; EXPRESSED DURING: 8 growth stages;
CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13,
all-beta (InterPro:IPR013780), Immunoglobulin E-set
(InterPro:IPR014756), Glycoside hydrolase, catalytic core
(InterPro:IPR017853), Alpha-amylase, C-terminal all beta
(InterPro:IPR006048), Glycoside hydrolase, subgroup,
catalytic core (InterPro:IPR013781), Glycosyl hydrolase,
family 13, catalytic domain (InterPro:IPR006047); BEST
Arabidopsis thaliana protein match is: starch branching
enzyme 2.1 (TAIR:AT2G36390.1); Has 10844 Blast hits to
10504 proteins in 2056 species: Archae - 101; Bacteria -
8205; Metazoa - 231; Fungi - 225; Plants - 1250; Viruses -
0; Other Eukaryotes - 832 (source: NCBI BLink)."
/db_xref="TAIR:AT3G20440"
/db_xref="Araport:AT3G20440"
intron_pos 92:2 (1/20)
intron_pos 116:2 (2/20)
intron_pos 138:1 (3/20)
intron_pos 366:1 (4/20)
intron_pos 424:0 (5/20)
intron_pos 454:0 (6/20)
intron_pos 479:1 (7/20)
intron_pos 515:1 (8/20)
intron_pos 545:2 (9/20)
intron_pos 579:2 (10/20)
intron_pos 614:0 (11/20)
intron_pos 660:0 (12/20)
intron_pos 684:0 (13/20)
intron_pos 719:0 (14/20)
intron_pos 745:0 (15/20)
intron_pos 781:0 (16/20)
intron_pos 808:0 (17/20)
intron_pos 843:0 (18/20)
intron_pos 871:2 (19/20)
intron_pos 890:0 (20/20)
BEGIN
1 MVSLSNQTRF SFHPNNLVVS EKRRLGISGV NFPRKIKLKI TCFAAERPRQ EKQKKKSQSQ
61 STSDAEAGVD PVGFLTRLGI ADRIFAQFLR ERHKALKDLK DEIFKRHFDF RDFASGFELL
121 GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR
181 EGEEPDELYF QQYNYVDDYD KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE
241 QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301 SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA
361 TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI YECHVGISGS EPKVSTFEEF
421 TKKVLPHVKR AGYNAIQLIG VPEHKDYFTV GYRVTNFFAA SSRYGTPDDF KRLVDEAHGL
481 GLLVFLDIVH SYAAADQMVG LSLFDGSNDC YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI
541 SNLNWWITEY QVDGYQFHSL ASMIYTHNGF ASFNNDLDDY CNQYVDRDAL MYLILANEIL
601 HVQHPNIITI AEDATYYPGL CEPVSQGGLG FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI
661 VSTLVANKEY ADKMLSYAEN HNQSISGGRS FAEILFGGVD NGSPGGKELL DRGISLHKMI
721 RLITFTSGGR AYLNFMGNEF GHPERVEFPT QSNNFSFSLA NRRWDLLESG VHHHLFSFDK
781 ELMDLDKSKG ILSRGLPSIH HVNDANMVIS FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE
841 YTMILNSDEV KYGGQGIVTE DHYLQRSISK RIDGQRNCLE VFLPSRTAQV YKLTRILRI
//