LOCUS AEE76378.1 869 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Alpha amylase family protein protein.
ACCESSION CP002686-3849
PROTEIN_ID AEE76378.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EMB2729"
/locus_tag="AT3G20440"
/gene_synonym="BE1"
/gene_synonym="BRANCHING ENZYME 1"
/gene_synonym="EMBRYO DEFECTIVE 2729"
/inference="Similar to RNA sequence,
EST:INSD:ES177632.1,INSD:ES085678.1,INSD:ES018521.1,
INSD:AV547019.1,INSD:ES093857.1,INSD:AU230992.1,
INSD:EL980892.1,INSD:BP868171.1,INSD:ES068356.1,
INSD:AU239658.1,INSD:ES167674.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK118785.1"
/note="EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN:
cation binding, catalytic activity, alpha-amylase
activity; INVOLVED IN: post-embryonic development,
carbohydrate metabolic process, embryo development ending
in seed dormancy; LOCATED IN: chloroplast, plastid;
EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8
growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl
hydrolase, family 13, all-beta (InterPro:IPR013780),
Immunoglobulin E-set (InterPro:IPR014756), Glycoside
hydrolase, catalytic core (InterPro:IPR017853),
Alpha-amylase, C-terminal all beta (InterPro:IPR006048),
Glycoside hydrolase, subgroup, catalytic core
(InterPro:IPR013781), Glycosyl hydrolase, family 13,
catalytic domain (InterPro:IPR006047); BEST Arabidopsis
thaliana protein match is: starch branching enzyme 2.1
(TAIR:AT2G36390.1); Has 7798 Blast hits to 7473 proteins
in 1903 species: Archae - 76; Bacteria - 5544; Metazoa -
204; Fungi - 180; Plants - 1205; Viruses - 0; Other
Eukaryotes - 589 (source: NCBI BLink)."
/db_xref="TAIR:AT3G20440"
/db_xref="Araport:AT3G20440"
intron_pos 92:2 (1/19)
intron_pos 116:2 (2/19)
intron_pos 138:1 (3/19)
intron_pos 366:1 (4/19)
intron_pos 424:0 (5/19)
intron_pos 449:1 (6/19)
intron_pos 485:1 (7/19)
intron_pos 515:2 (8/19)
intron_pos 549:2 (9/19)
intron_pos 584:0 (10/19)
intron_pos 630:0 (11/19)
intron_pos 654:0 (12/19)
intron_pos 689:0 (13/19)
intron_pos 715:0 (14/19)
intron_pos 751:0 (15/19)
intron_pos 778:0 (16/19)
intron_pos 813:0 (17/19)
intron_pos 841:2 (18/19)
intron_pos 860:0 (19/19)
BEGIN
1 MVSLSNQTRF SFHPNNLVVS EKRRLGISGV NFPRKIKLKI TCFAAERPRQ EKQKKKSQSQ
61 STSDAEAGVD PVGFLTRLGI ADRIFAQFLR ERHKALKDLK DEIFKRHFDF RDFASGFELL
121 GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR
181 EGEEPDELYF QQYNYVDDYD KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE
241 QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301 SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA
361 TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI YECHVGISGS EPKVSTFEEF
421 TKKVTNFFAA SSRYGTPDDF KRLVDEAHGL GLLVFLDIVH SYAAADQMVG LSLFDGSNDC
481 YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI SNLNWWITEY QVDGYQFHSL ASMIYTHNGF
541 ASFNNDLDDY CNQYVDRDAL MYLILANEIL HVQHPNIITI AEDATYYPGL CEPVSQGGLG
601 FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI VSTLVANKEY ADKMLSYAEN HNQSISGGRS
661 FAEILFGGVD NGSPGGKELL DRGISLHKMI RLITFTSGGR AYLNFMGNEF GHPERVEFPT
721 QSNNFSFSLA NRRWDLLESG VHHHLFSFDK ELMDLDKSKG ILSRGLPSIH HVNDANMVIS
781 FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE YTMILNSDEV KYGGQGIVTE DHYLQRSISK
841 RIDGQRNCLE VFLPSRTAQV YKLTRILRI
//