LOCUS AEE76357.1 743 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily
protein protein.
ACCESSION CP002686-3820
PROTEIN_ID AEE76357.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G20280"
/inference="Similar to RNA sequence,
EST:INSD:EL104770.1,INSD:EH841947.1,INSD:EH987415.1,
INSD:EL153103.1,INSD:AV825502.1,INSD:AV791418.1,
INSD:BP785097.1,INSD:BP597174.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT020377.1"
/note="RING/FYVE/PHD zinc finger superfamily protein;
FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN:
regulation of transcription, DNA-dependent; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 7 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786), Zinc finger, PHD-type
(InterPro:IPR001965), Zinc finger, FYVE/PHD-type
(InterPro:IPR011011), Zinc finger, PHD-finger
(InterPro:IPR019787); BEST Arabidopsis thaliana protein
match is: RING/FYVE/PHD zinc finger superfamily protein
(TAIR:AT1G50620.1); Has 11431 Blast hits to 6184 proteins
in 707 species: Archae - 24; Bacteria - 2884; Metazoa -
3648; Fungi - 2195; Plants - 284; Viruses - 200; Other
Eukaryotes - 2196 (source: NCBI BLink)."
/db_xref="TAIR:AT3G20280"
/db_xref="Araport:AT3G20280"
intron_pos 132:0 (1/3)
intron_pos 164:1 (2/3)
intron_pos 205:1 (3/3)
BEGIN
1 MDIATSNAPM NLESVAMVDG NGAEPVSPPA KKPRFDEEMN RVAEIVLVLS ALGRMRGGET
61 PTALELELMF EARSKLAGMC LEFDPKDIIR KDDVKSVIED LGFNGKLKDQ RLGFRAPTVT
121 ISEKLSLGKR KMEEAEKYPT TSTVSTGYTL SQPNGSLASP GGLANKASVA HQWPSSEVAT
181 ANTSGSHFKL DRPQMVLNGA SQGTPVSSAN YYAEPWSAQL PSTISFSTAP DKKVPIQSSV
241 RTADPSFRPF RHGTFTGTNQ PMHYSQTSSF GGNHTEIAKI IHKFLQPRVK QYPLWNPPSR
301 EYMSRAMACQ ICEVTINEMD TLLICDACEK AYHLKCLQGN NMKGVPKSEW HCSRCVQAFN
361 GKPFPPTYGR ATRAVATTTA KMPFRAAGVL SSSAKKIGPM DIKANQQKPI VSTFSRLQNT
421 GLVSGAATTS QFESASVNAK TTASAAKTTN IGSQGSKENV ACGANSPAPV SLTETPNRTG
481 IASTISVINN GLISKPLTPV GTMSSTSPLP VVNQLPVNAT SNASPSTPIT ASLVAQAPTV
541 TQNGDGSSTA SGTADHSILN ADITTQVHTL TVTSSSNSQQ AVSHSEVAKA TEDAAPLENV
601 SECEKPSEST SHPDSLNDKT ISENVQESSK DAKVDSEACQ NHPTASPATV VPDQDSTITA
661 APSVTQEDSA FNTEKTPPQP LSVSSNYDSQ TEKETPNVQD SVHNVPGDSE KGKGLNGLDD
721 RHQEQPSEPE FYKSDSVKEE NAA
//