LOCUS AEE76317.1 309 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana translocase of the outer mitochondrial
membrane 40 protein.
ACCESSION CP002686-3749
PROTEIN_ID AEE76317.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="TOM40"
/locus_tag="AT3G20000"
/gene_synonym="translocase of the outer mitochondrial
membrane 40"
/inference="Similar to RNA sequence,
EST:INSD:DR330941.1,INSD:ES105709.1,INSD:EG475305.1,
INSD:AV538897.1,INSD:BP635640.1,INSD:DR330963.1,
INSD:DR330961.1,INSD:EL126559.1,INSD:EH964722.1,
INSD:EL066432.1,INSD:EL070426.1,INSD:DR330946.1,
INSD:EL230354.1,INSD:EG420197.1,INSD:EL044050.1,
INSD:EL996214.1,INSD:ES089270.1,INSD:DR330952.1,
INSD:BP794449.1,INSD:EG420186.1,INSD:EL070628.1,
INSD:ES026003.1,INSD:DR330956.1,INSD:DR295314.1,
INSD:EG475301.1,INSD:DR330955.1,INSD:DR295318.1,
INSD:BP797187.1,INSD:BP799323.1,INSD:DR330966.1,
INSD:ES097559.1,INSD:DR330964.1,INSD:DR373924.1,
INSD:EH820837.1,INSD:AV533845.1,INSD:AV551337.1,
INSD:BG459496.1,INSD:ES017634.1,INSD:BE662856.1,
INSD:DR292825.1,INSD:EL988287.1,INSD:ES156827.1,
INSD:ES030033.1,INSD:DR330969.1,INSD:EH943734.1,
INSD:EL093726.1,INSD:AV537632.1,INSD:EL236932.1,
INSD:DR330958.1,INSD:ES195391.1,INSD:DR330957.1,
INSD:DR295319.1,INSD:CA781433.1,INSD:DR330949.1,
INSD:DR330943.1,INSD:AV538998.1,INSD:EL070218.1,
INSD:DR330967.1,INSD:AV794402.1,INSD:ES017636.1,
INSD:DR330948.1,INSD:AV795184.1,INSD:DR371815.1,
INSD:DR295315.1,INSD:DR330953.1,INSD:ES215655.1,
INSD:DR330968.1,INSD:DR330965.1,INSD:AV804360.1,
INSD:DR330945.1,INSD:DR330947.1,INSD:DR330940.1,
INSD:EL991180.1,INSD:AV551275.1,INSD:AV550046.1,
INSD:DR330942.1,INSD:DR295317.1,INSD:EH841858.1,
INSD:CF773058.1,INSD:BP629777.1,INSD:DR330960.1,
INSD:EG526886.1,INSD:EL181131.1,INSD:AV549620.1,
INSD:DR295316.1,INSD:ES090544.1,INSD:AV540656.1,
INSD:EL974839.1,INSD:DR330959.1,INSD:DR330950.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822251.1,INSD:AY117216.1,INSD:AY050925.1,
INSD:BX824709.1,INSD:BX824823.1"
/note="translocase of the outer mitochondrial membrane 40
(TOM40); FUNCTIONS IN: voltage-gated anion channel
activity, P-P-bond-hydrolysis-driven protein transmembrane
transporter activity; INVOLVED IN: protein targeting to
mitochondrion, anion transport; LOCATED IN: mitochondrial
outer membrane, mitochondrion, mitochondrial inner
membrane, plasma membrane, mitochondrial outer membrane
translocase complex; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925);
BEST Arabidopsis thaliana protein match is: Eukaryotic
porin family protein (TAIR:AT1G50400.1); Has 530 Blast
hits to 530 proteins in 190 species: Archae - 0; Bacteria
- 0; Metazoa - 257; Fungi - 140; Plants - 72; Viruses - 0;
Other Eukaryotes - 61 (source: NCBI BLink)."
/db_xref="TAIR:AT3G20000"
/db_xref="Araport:AT3G20000"
intron_pos 43:1 (1/10)
intron_pos 70:2 (2/10)
intron_pos 105:0 (3/10)
intron_pos 137:0 (4/10)
intron_pos 154:0 (5/10)
intron_pos 176:0 (6/10)
intron_pos 210:0 (7/10)
intron_pos 233:0 (8/10)
intron_pos 261:0 (9/10)
intron_pos 293:0 (10/10)
BEGIN
1 MADLLPPLTA AQVDAKTKVD EKVDYSNLPS PVPYEELHRE ALMSLKSDNF EGLRFDFTRA
61 LNQKFSLSHS VMMGPTEVPA QSPETTIKIP TAHYEFGANY YDPKLLLIGR VMTDGRLNAR
121 LKADLTDKLV VKANALITNE EHMSQAMFNF DYMGSDYRAQ LQLGQSALIG ATYIQSVTNH
181 LSLGGEIFWA GVPRKSGIGY AARYETDKMV ASGQVASTGA VVMNYVQKIS DKVSLATDFM
241 YNYFSRDVTA SVGYDYMLRQ ARVRGKIDSN GVASALLEER LSMGLNFLLS AELDHKKKDY
301 KFGFGLTVG
//