LOCUS AEE76307.1 340 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002686-3726
PROTEIN_ID AEE76307.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G19910"
/inference="Similar to RNA sequence,
EST:INSD:EL241072.1,INSD:BP847615.1,INSD:DR278838.1,
INSD:DR278835.1,INSD:EH852330.1,INSD:AV784085.1,
INSD:BP810050.1,INSD:DR278840.1,INSD:DR278841.1,
INSD:AV800601.1,INSD:ES182024.1,INSD:BP663567.1,
INSD:EH802809.1,INSD:DR278839.1,INSD:AI996515.1,
INSD:EH993138.1,INSD:ES207555.1,INSD:AI997368.1,
INSD:BP843154.1,INSD:EG474731.1,INSD:AV823162.1,
INSD:BP865396.1,INSD:DR379312.1,INSD:AV540570.1,
INSD:BP660818.1,INSD:ES036857.1,INSD:AV784576.1,
INSD:BP631853.1,INSD:AV823579.1,INSD:AV539192.1,
INSD:AV797941.1,INSD:AV796050.1,INSD:BP577524.1,
INSD:BP604134.1,INSD:BP603633.1,INSD:EG465914.1,
INSD:DR278837.1,INSD:EL063388.1,INSD:EL029659.1,
INSD:DR278836.1,INSD:EG474720.1,INSD:BP619750.1,
INSD:BP627037.1,INSD:EH985518.1,INSD:EG465915.1,
INSD:BP632721.1,INSD:AV790501.1,INSD:BE526874.1,
INSD:BP599261.1,INSD:EL205248.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY045984.1,INSD:AY084453.1,INSD:BX823999.1,
INSD:BX824923.1,INSD:AY045590.1,INSD:BX823795.1,
INSD:AY079353.1,INSD:BX822276.1,INSD:BX822444.1,
INSD:BX823600.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT3G63530.2); Has 15086 Blast hits to 12507 proteins
in 429 species: Archae - 8; Bacteria - 555; Metazoa -
4333; Fungi - 1497; Plants - 5032; Viruses - 175; Other
Eukaryotes - 3486 (source: NCBI BLink)."
/db_xref="TAIR:AT3G19910"
/db_xref="Araport:AT3G19910"
intron_pos 108:0 (1/6)
intron_pos 219:1 (2/6)
intron_pos 233:0 (3/6)
intron_pos 247:0 (4/6)
intron_pos 287:2 (5/6)
intron_pos 324:0 (6/6)
BEGIN
1 MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA
61 VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL ARTLQEQERA YMMLTMNSEI
121 SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN
181 SDIEEVAYTD DEAYARALQE AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP
241 DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301 LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
//