LOCUS AEE76299.1 554 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Phototropic-responsive NPH3 family
protein protein.
ACCESSION CP002686-3715
PROTEIN_ID AEE76299.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G19850"
/inference="Similar to RNA sequence,
EST:INSD:BP856231.1,INSD:EL099123.1,INSD:ES183386.1,
INSD:EL107432.1,INSD:ES141861.1,INSD:BP860657.1,
INSD:EG476564.1,INSD:BP858456.1,INSD:AA650922.1,
INSD:EH892307.1,INSD:EL010009.1,INSD:EL061653.1,
INSD:BP865803.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK176753.1,INSD:BX822963.1,INSD:AK176817.1,
INSD:AK175315.1,INSD:BT012660.1,INSD:AK222235.1"
/note="Phototropic-responsive NPH3 family protein;
FUNCTIONS IN: signal transducer activity; INVOLVED IN:
response to light stimulus; LOCATED IN: endomembrane
system; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3
(InterPro:IPR004249), BTB/POZ (InterPro:IPR013069),
BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like
(InterPro:IPR000210); BEST Arabidopsis thaliana protein
match is: Phototropic-responsive NPH3 family protein
(TAIR:AT1G50280.1); Has 817 Blast hits to 802 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi -
0; Plants - 810; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink)."
/db_xref="TAIR:AT3G19850"
/db_xref="Araport:AT3G19850"
intron_pos 22:0 (1/2)
intron_pos 415:0 (2/2)
BEGIN
1 MSLCCDLQIN LNNQFTFFVN QDLISEYSGF LRKMIKQSNK KKKNHKNSRI IIEVEDFPGG
61 SDGFDLVLRF CYGGGISIDV SNVSILHCSS VFLEMTEKLC SSNLLLRTEK FLEGMFYWSW
121 NDIVLCLKSC EQVFLHADSY GLVDKLVFGV LAKIPQNSDV SHVFSSSSPS SSASASASSQ
181 SPETAMIRSY SDKRSTSRSF SCRTSNEWWF DDMSILGPKI IEKLINTLGA HDKNNDSLVL
241 TKFLLHYLKT KVPNKSTNKL EYSGLADTAV QGVVFAAKTA FSCRKMFWVL RVLSGFSISK
301 ESRIGLERVI GEMLDQATLD DLLIPAGGKG EKGVYDVDLV IRLLKVFVRI GNTEEGDQNL
361 RMRRIGKLID KYLREISPDQ NLKVSKFLEV AESLPDSARD WFDGLYRAIN IYLESHPKLS
421 SEDRTKLCRC LNYKKLTLDT CKQLAKNPKI PPNIAVQALK SQQLSNETRP HSREDKNKVN
481 KIWNSRKYLE EKPILVCLKG FDMSEKFEDD LMMNLERKQW NNSEKVSKEK KSEVMSRSVR
541 HGHTHSSSSF PRLC
//