LOCUS AEE76284.1 520 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Vacuolar sorting protein 9 (VPS9)
domain-containing protein protein.
ACCESSION CP002686-3695
PROTEIN_ID AEE76284.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="VPS9A"
/locus_tag="AT3G19770"
/gene_synonym="ARABIDOPSIS THALIANA VACUOLAR PROTEIN
SORTING 9A"
/gene_synonym="ATVPS9A"
/gene_synonym="MMB12.26"
/gene_synonym="VPS9"
/inference="Similar to RNA sequence,
EST:INSD:DR350204.1,INSD:ES156835.1,INSD:EL046409.1,
INSD:N65863.1,INSD:DR350203.1,INSD:AV566483.1,
INSD:DR350205.1,INSD:CB258858.1,INSD:BP620516.1,
INSD:BP807645.1,INSD:BP607127.1,INSD:ES200344.1,
INSD:BU636081.1,INSD:BP804185.1,INSD:BP564070.1,
INSD:BP564209.1,INSD:AV548704.1,INSD:EL099213.1,
INSD:ES082074.1,INSD:AV784299.1,INSD:ES080087.1,
INSD:EL125918.1,INSD:AV815187.1,INSD:BP806788.1,
INSD:EL340327.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY045810.1,INSD:BX823509.1,INSD:AY079338.1"
/note="VPS9A; FUNCTIONS IN: Rho guanyl-nucleotide exchange
factor activity; INVOLVED IN: cell plate assembly,
transport, cell wall biogenesis, post-embryonic root
development, embryo development; LOCATED IN: cytosol,
nucleus, membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Vacuolar sorting protein 9, subgroup
(InterPro:IPR013995), Vacuolar sorting protein 9
(InterPro:IPR003123); BEST Arabidopsis thaliana protein
match is: Vacuolar sorting protein 9 (VPS9) domain
(TAIR:AT5G09320.1); Has 1001 Blast hits to 992 proteins in
208 species: Archae - 0; Bacteria - 4; Metazoa - 518;
Fungi - 219; Plants - 81; Viruses - 0; Other Eukaryotes -
179 (source: NCBI BLink)."
/db_xref="TAIR:AT3G19770"
/db_xref="Araport:AT3G19770"
intron_pos 31:2 (1/4)
intron_pos 81:0 (2/4)
intron_pos 138:0 (3/4)
intron_pos 198:0 (4/4)
BEGIN
1 MENTDVFLGL HDFLERMRKP SAGDFVKSIK SFIVSFSNNA PDPEKDCAMV QEFFSKMEAA
61 FRAHPLWSGC SEEELDSAGD GLEKYVMTKL FTRVFASNTE EVIADEKLFQ KMSLVQQFIS
121 PENLDIQPTF QNESSWLLAQ KELQKINMYK APRDKLVCIL NCCKVINNLL LNASIASNEN
181 APGADEFLPV LIYVTIKANP PQLHSNLLYI QRYRRESKLV GEAAYFFTNI LSAESFISNI
241 DAKSISLDEA EFEKNMESAR ARISGLDSQT YQTGHGSAPP PRDESTLQKT QSLNPKRENT
301 LFQSKSSDSL SGTNELLNIN SETPMKKAES ISDLENKGAT LLKDTEPSKV FQEYPYIFAS
361 AGDLRIGDVE GLLNSYKQLV FKYVCLTKGL GDGTSLAPSS SPLQASSGFN TSKESEDHRR
421 SSSDVQMTKE TDRSVDDLIR ALHGEGEDVN NLSDVKHEEY GAMLVEGKDE ERDSKVQGEV
481 DAKDIELMKQ IPKREGDNSS SRPAEDEDVG SKQPVTEASE
//