LOCUS AEE76269.1 372 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Radical SAM superfamily protein protein.
ACCESSION CP002686-3677
PROTEIN_ID AEE76269.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G19630"
/inference="Similar to RNA sequence,
EST:INSD:BP662112.1,INSD:DR234151.1,INSD:EL032479.1,
INSD:ES039750.1,INSD:DR234153.1,INSD:DR234154.1,
INSD:EH982690.1,INSD:ES026615.1,INSD:DR234147.1,
INSD:BX839250.1,INSD:DR234152.1,INSD:BP665194.1,
INSD:DR234155.1,INSD:DR234148.1,INSD:DR234156.1,
INSD:DR376537.1,INSD:DR234146.1,INSD:EL326652.1,
INSD:DR234157.1,INSD:DR234150.1,INSD:AU236730.1,
INSD:AU227701.1,INSD:EL270985.1,INSD:DR234149.1,
INSD:EL247859.1,INSD:BP868349.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823874.1,INSD:BT003921.1,INSD:BX823455.1,
INSD:BT005008.1,INSD:BX823537.1"
/note="Radical SAM superfamily protein; FUNCTIONS IN:
iron-sulfur cluster binding, catalytic activity, RNA
methyltransferase activity; INVOLVED IN: rRNA processing;
LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal RNA large subunit methyltransferase
RlmN; (InterPro:IPR004383), Radical SAM
(InterPro:IPR007197); BEST Arabidopsis thaliana protein
match is: Radical SAM superfamily protein
(TAIR:AT1G60230.1); Has 6931 Blast hits to 6927 proteins
in 2338 species: Archae - 5; Bacteria - 5129; Metazoa - 1;
Fungi - 1; Plants - 138; Viruses - 3; Other Eukaryotes -
1654 (source: NCBI BLink)."
/db_xref="TAIR:AT3G19630"
/db_xref="Araport:AT3G19630"
intron_pos 86:0 (1/6)
intron_pos 123:0 (2/6)
intron_pos 168:0 (3/6)
intron_pos 203:0 (4/6)
intron_pos 259:2 (5/6)
intron_pos 293:0 (6/6)
BEGIN
1 MKLKSVFDAS EIKSEFESAG INPKFAIQIW KYVIQNPDCV WDEIPSLPSA AYSLLHSKFK
61 TLTSSLHSLF HSSDGTTSKL LIKLQNGAFV EAVVMRYDTR LGMLGGKPRP GGIRSTLCIS
121 SQVGCKMGCT FCATGTMGFK SNLTSGEIVE QLVHASRIAD IRNIVFMGMG EPLNNYNAVV
181 EAVRVMLNQP FQLSPKRITI STVGIVHAIN KLHNDLPGVS LAVSLHAPVQ EIRCQIMPAA
241 RAFPLQKLMD ALQTFQKNSQ QKIFIEYIML DGVNDQEQHA HLLGELLKTF QVVINLIPFN
301 PIGSTSQFET SSIQGVSRFQ KILRETYKIR TTIRKEMGQD ISGACGQLVV NQPDIKKTPG
361 TVELRDIEDL LL
//