LOCUS AEE76233.1 421 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana plant U-box 25 protein.
ACCESSION CP002686-3624
PROTEIN_ID AEE76233.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PUB25"
/locus_tag="AT3G19380"
/gene_synonym="plant U-box 25"
/inference="Similar to RNA sequence,
EST:INSD:BP839854.1,INSD:DR351316.1,INSD:BX837444.1,
INSD:CB255884.1,INSD:BX840996.1,INSD:DR381812.1,
INSD:BP796220.1,INSD:EH882475.1,INSD:CB256673.1,
INSD:DR351315.1,INSD:T42091.1,INSD:AV827046.1,
INSD:BX837316.1,INSD:BX836822.1,INSD:AA585864.1,
INSD:EH872303.1,INSD:DR351317.1,INSD:BX834409.1,
INSD:AV544647.1,INSD:BP820601.1,INSD:DR348586.1,
INSD:CB255873.1,INSD:AV553068.1,INSD:BX840032.1,
INSD:AI997540.1,INSD:AV797103.1,INSD:ES084199.1,
INSD:DR348585.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824334.1,INSD:BX824983.1,INSD:BX823093.1,
INSD:AK229923.1,INSD:BX824924.1,INSD:BX822569.1,
INSD:AY058183.1,INSD:AY086503.1,INSD:BT025982.1,
INSD:BX822547.1"
/note="plant U-box 25 (PUB25); FUNCTIONS IN:
ubiquitin-protein ligase activity, binding; INVOLVED IN:
response to chitin; LOCATED IN: ubiquitin ligase complex;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U box domain
(InterPro:IPR003613), Armadillo-like helical
(InterPro:IPR011989), Armadillo-type fold
(InterPro:IPR016024); BEST Arabidopsis thaliana protein
match is: plant U-box 26 (TAIR:AT1G49780.1); Has 2521
Blast hits to 2449 proteins in 133 species: Archae - 0;
Bacteria - 22; Metazoa - 177; Fungi - 24; Plants - 2091;
Viruses - 3; Other Eukaryotes - 204 (source: NCBI BLink)."
/db_xref="TAIR:AT3G19380"
/db_xref="Araport:AT3G19380"
BEGIN
1 MPRNIEPLDL GIQIPYHFRC PISLELMQDP VTVCTGQTYD RASIESWVSI GNNTTCPVTR
61 APLSDFTLIP NHTLRRLIQE WCVANRSNGV ERIPTPKQPA DPTSVRALLS QASAITGTHV
121 SVRSRAAALR RLRGFARDSD KNRVLIAAHN ATEILIKILF SETTSSELVS ESLALLVMLP
181 ITEPNQFVSI SSDPGRVEFL TRLLFDSSIE TRVNAAALIE IVSTGTKSAD LKGSISNSES
241 VFEGVLDLLR NPISSRRALK IGIKTLFALC SVKSTRHIAI TAGAPEILID RLAADFDRCD
301 TERALATVEL LCRTPEGCAA FGEHALTVPL LVKTILRVSD RATEYAAGAL LALCTAEERW
361 REEAAGAGVV VQLLLMVQSE CTERAKKKAQ KLLKLLRDSW PDYNSFANSD DFGCSSQVVP
421 F
//