LOCUS AEE76195.1 446 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PIF / Ping-Pong family of plant transposase
protein.
ACCESSION CP002686-3576
PROTEIN_ID AEE76195.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G19120"
/inference="Similar to RNA sequence,
EST:INSD:DR348589.1,INSD:ES042562.1,INSD:ES191790.1,
INSD:DR348597.1,INSD:AV805021.1,INSD:DR348598.1,
INSD:AV824128.1,INSD:EH880964.1,INSD:DR348599.1,
INSD:ES088262.1,INSD:DR348590.1,INSD:BU634968.1,
INSD:ES139935.1,INSD:DR381357.1,INSD:EH859291.1,
INSD:BX836742.1,INSD:EH937791.1,INSD:EH811152.1,
INSD:BX841183.1,INSD:DR348595.1,INSD:ES067435.1,
INSD:DR348593.1,INSD:EH868567.1,INSD:ES078022.1,
INSD:DR348594.1,INSD:DR348591.1,INSD:BP601390.1,
INSD:ES184225.1,INSD:ES055669.1,INSD:ES193443.1,
INSD:EH798260.1,INSD:ES035419.1,INSD:ES154982.1,
INSD:BP869041.1,INSD:ES148028.1,INSD:DR348596.1,
INSD:ES148407.1,INSD:ES132671.1,INSD:DR348592.1,
INSD:AV785284.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY070731.1,INSD:BX822980.1,INSD:BX822951.1,
INSD:BX824725.1,INSD:BX824104.1,INSD:BX823742.1,
INSD:AY149933.1,INSD:AY085590.1,INSD:BX822325.1,
INSD:BX822085.1"
/note="PIF / Ping-Pong family of plant transposases;
LOCATED IN: chloroplast; EXPRESSED IN: 16 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Putative harbinger transposase-derived
nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G12010.1); Has
644 Blast hits to 642 proteins in 76 species: Archae - 0;
Bacteria - 0; Metazoa - 379; Fungi - 49; Plants - 189;
Viruses - 3; Other Eukaryotes - 24 (source: NCBI BLink)."
/db_xref="TAIR:AT3G19120"
/db_xref="Araport:AT3G19120"
BEGIN
1 MEEAFMAMLS HLLHLQNSLD PTSTLFSSAS TSSQSSTTPS SLLSTSSAAP LLFFTLASLL
61 SFLAVNRSST ESSSSSESPS PSPPPPLADG DYSVAAFRAL TTDHIWSLDA PLRDARWRSL
121 YGLSYPVFIT VVDKLKPFIT ASNLSLPADY AVAMVLSRLA HGCSAKTLAS RYSLDPYLIS
181 KITNMVTRLL ATKLYPEFIK IPVGKRRLIE TTQGFEELTS LPNICGAIDS TPVKLRRRTK
241 LNPRNIYGCK YGYDAVLLQV VADHKKIFWD VCVKAPGGED DSSHFRDSLL YKRLTSGDIV
301 WEKVINIRGH HVRPYIVGDW CYPLLSFLMT PFSPNGSGTP PENLFDGMLM KGRSVVVEAI
361 GLLKARWKIL QSLNVGVNHA PQTIVACCVL HNLCQIAREP EPEIWKDPDE AGTPARVLES
421 ERQFYYYGES LRQALAEDLH QRLSSR
//