LOCUS AEE76152.1 206 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB GTPase homolog G3F protein.
ACCESSION CP002686-3513
PROTEIN_ID AEE76152.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RAB7B"
/locus_tag="AT3G18820"
/gene_synonym="ATRAB7B"
/gene_synonym="ATRABG3F"
/gene_synonym="RAB GTPase homolog G3F"
/gene_synonym="RAB71"
/gene_synonym="RABG3F"
/inference="Similar to RNA sequence,
EST:INSD:AA042531.1,INSD:EH951913.1,INSD:ES042643.1,
INSD:BP637495.1,INSD:R29926.1,INSD:Z34577.1,
INSD:EL331928.1,INSD:BP777504.1,INSD:DR238823.1,
INSD:DR238829.1,INSD:EH891072.1,INSD:DR238825.1,
INSD:EL325470.1,INSD:BP821206.1,INSD:ES214846.1,
INSD:EL249723.1,INSD:EL241758.1,INSD:EL055859.1,
INSD:EL315647.1,INSD:BE530541.1,INSD:BP791426.1,
INSD:EH825496.1,INSD:EG424993.1,INSD:AI100525.1,
INSD:BU636312.1,INSD:EL181442.1,INSD:R64738.1,
INSD:BP854258.1,INSD:EG425007.1,INSD:EL186035.1,
INSD:ES022431.1,INSD:BP632037.1,INSD:EG527811.1,
INSD:EL283566.1,INSD:EL099750.1,INSD:BP664371.1,
INSD:BP663700.1,INSD:BP855650.1,INSD:ES090708.1,
INSD:BP807608.1,INSD:CB258808.1,INSD:EL341119.1,
INSD:ES022091.1,INSD:BP841482.2,INSD:EL148826.1,
INSD:EH835605.1,INSD:EL295092.1,INSD:EL278380.1,
INSD:AV781570.1,INSD:DR238833.1,INSD:EL018369.1,
INSD:BE528413.1,INSD:BP632184.1,INSD:BE520327.1,
INSD:EL972173.1,INSD:CB264966.1,INSD:AV783158.1,
INSD:DR238832.1,INSD:EH991672.1,INSD:EH884513.1,
INSD:EH945896.1,INSD:BP825025.1,INSD:AV558716.1,
INSD:EL142781.1,INSD:EL291703.1,INSD:DR238821.1,
INSD:DR238826.1,INSD:EL326632.1,INSD:EL049794.1,
INSD:ES010180.1,INSD:DR378859.1,INSD:DR238831.1,
INSD:DR238824.1,INSD:BE037975.1,INSD:EL308256.1,
INSD:AV799227.1,INSD:DR369078.1,INSD:CB258797.1,
INSD:EL277605.1,INSD:ES043708.1,INSD:DR238827.1,
INSD:EH876849.1,INSD:EH928259.1,INSD:BP612183.1,
INSD:EL111636.1,INSD:BE527179.1,INSD:EL027619.1,
INSD:CB254865.1,INSD:ES200930.1,INSD:EL209823.1,
INSD:EL250855.1,INSD:EL132465.1,INSD:EL000885.1,
INSD:EL031049.1,INSD:EL207994.1,INSD:EL133338.1,
INSD:BP584415.1,INSD:CB264892.1,INSD:DR238822.1,
INSD:BP670054.1,INSD:BP824103.2,INSD:EL173715.1,
INSD:AV559422.1,INSD:EL015035.1,INSD:BP845371.2,
INSD:AV795306.1,INSD:EL123192.1,INSD:EL274863.1,
INSD:AV822404.1,INSD:AA712574.1,INSD:DR238828.1,
INSD:BP828534.1,INSD:T13775.1,INSD:T20706.1,
INSD:EL337721.1,INSD:BP660543.1,INSD:EL176880.1,
INSD:EH887677.1,INSD:BP783981.1,INSD:EL150424.1,
INSD:EL258753.1,INSD:BP652219.1,INSD:DR238819.1,
INSD:EL220688.1,INSD:EL193544.1,INSD:BP849181.1,
INSD:EL307682.1,INSD:BP824998.2,INSD:T46374.1,
INSD:EH952405.1,INSD:ES036008.1,INSD:DR238820.1,
INSD:BP848293.1,INSD:EL975239.1,INSD:T22509.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AB071846.1,INSD:AY059072.1,INSD:AY035137.1,
INSD:AY084266.1"
/note="RAB GTPase homolog G3F (RAB7B); FUNCTIONS IN: GTP
binding; INVOLVED IN: protein transport, small GTPase
mediated signal transduction; LOCATED IN: plasma membrane,
nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras
GTPase (InterPro:IPR001806), Small GTP-binding protein
(InterPro:IPR005225), Small GTPase (InterPro:IPR020851),
Ras (InterPro:IPR013753), Ras small GTPase, Rab type
(InterPro:IPR003579); BEST Arabidopsis thaliana protein
match is: RAB GTPase homolog G3E (TAIR:AT1G49300.2); Has
26432 Blast hits to 26399 proteins in 759 species: Archae
- 38; Bacteria - 171; Metazoa - 13566; Fungi - 4011;
Plants - 2887; Viruses - 20; Other Eukaryotes - 5739
(source: NCBI BLink)."
/db_xref="TAIR:AT3G18820"
/db_xref="Araport:AT3G18820"
intron_pos 18:2 (1/5)
intron_pos 61:0 (2/5)
intron_pos 110:0 (3/5)
intron_pos 137:0 (4/5)
intron_pos 185:2 (5/5)
BEGIN
1 MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ
61 IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN NWREEFLIQA SPSDPENFPF
121 VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG
181 EEEELYLPDT IDVGTSNQQR STGCEC
//