LOCUS AEE76144.1 625 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Autophagy-related protein 13 protein.
ACCESSION CP002686-3504
PROTEIN_ID AEE76144.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G18770"
/inference="Similar to RNA sequence,
EST:INSD:EL225664.1,INSD:ES085837.1,INSD:BX840337.1,
INSD:AI992403.1,INSD:ES009999.1,INSD:BP602421.1,
INSD:AU237411.1,INSD:AV819992.1,INSD:AU228470.1,
INSD:CB257567.1,INSD:BP810947.1,INSD:ES086891.1,
INSD:ES055580.1,INSD:EH967561.1,INSD:ES053624.1,
INSD:H77163.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK228910.1"
/note="Autophagy-related protein 13; LOCATED IN:
chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: 4 anthesis, petal differentiation and expansion
stage; CONTAINS InterPro DOMAIN/s: Autophagy-related
protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana
protein match is: Autophagy-related protein 13
(TAIR:AT3G49590.1); Has 480 Blast hits to 395 proteins in
141 species: Archae - 0; Bacteria - 18; Metazoa - 72;
Fungi - 154; Plants - 106; Viruses - 7; Other Eukaryotes -
123 (source: NCBI BLink)."
/db_xref="TAIR:AT3G18770"
/db_xref="Araport:AT3G18770"
intron_pos 444:0 (1/2)
intron_pos 504:2 (2/2)
BEGIN
1 MSSSHNRSNN NNSEGAKAEQ IIFEFFAKSL HIILESRTPF MSSRNFSGEQ MICSPSSSSS
61 SSSSVRPRDK WFNLALRECP AALESFDIGR RSSLEPLVVD VVLVVRPLVG DQSGKRELIR
121 NFSGKDYQSG WNSDQDELGC ETKNEQIIER WVVQYDNRKI RESVTTSSRR SSSNKLQVMY
181 KKATLLLRSL FVMVRLLPAY KIFRELNSSG QIFKFKLVPR VPSIVEPFTR KEEAEMQKFS
241 FTPVETICGR LCLSVLYRSL SDVSCEHSTP MSPTFITDYV GSPLADPLKR FPSLPLSYGS
301 PPLLPFQRRH SWSFDRYKAS PPSVSCSPSP TRSDSHALVS HPCSRHLPPH PSDIPTGRRK
361 ESYPEEYSPC QDFSPPPSPS APKHAVPRGI TRTESAPVRI PAPTFQSKEN VVAPSAHLKL
421 SRHASLKPVR NLGPGESGAA IDKLFLYGRD DFRRPSGVRP SSSSSPRISF SRSSSRSFQD
481 DFDDPDFPCP FDVEYDDITD RNSRPGSFDH RGDIHEPFDS SGSYPKKSQD AAVGALVRML
541 KKAPPLRQDV SESSRPEICS NNNKPAGAHE IAVASITASG IALASKTTAD ALEELRSYKE
601 MKNHLLLGQS TSNPSSVTIT SPFDV
//