LOCUS AEE76125.1 676 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc finger C-x8-C-x5-C-x3-H type
family protein protein.
ACCESSION CP002686-3480
PROTEIN_ID AEE76125.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G18640"
/inference="Similar to RNA sequence,
EST:INSD:BP828611.1,INSD:EL169464.1,INSD:EG501208.1,
INSD:EL273634.1,INSD:ES173827.1,INSD:EL009479.1,
INSD:BP812431.1,INSD:ES082532.1,INSD:EL989702.1,
INSD:ES171598.1,INSD:EG501212.1,INSD:EG501207.1,
INSD:EL981839.1,INSD:EL276095.1,INSD:BP815444.1,
INSD:EG501211.1,INSD:EG501214.1,INSD:EG501210.1,
INSD:BP854058.1,INSD:EG501213.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK175797.1,INSD:AK221759.1"
/note="Zinc finger C-x8-C-x5-C-x3-H type family protein;
FUNCTIONS IN: zinc ion binding, nucleic acid binding;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana
protein match is: histone-lysine N-methyltransferases
(TAIR:AT3G26850.2); Has 2096 Blast hits to 1919 proteins
in 216 species: Archae - 1; Bacteria - 45; Metazoa - 857;
Fungi - 199; Plants - 205; Viruses - 43; Other Eukaryotes
- 746 (source: NCBI BLink)."
/db_xref="TAIR:AT3G18640"
/db_xref="Araport:AT3G18640"
intron_pos 81:2 (1/2)
intron_pos 668:0 (2/2)
BEGIN
1 MEMSGLGRKR VSKWDSKEDT HHHHSSVNAN SASYYRDKES EPVRFNAESN GEARTRSRVS
61 QNNDNSYFSE QDGTRQQFVR RSGSRSNSRS RSRSRSPVYR ARRDAGSYDR HKTRTQVSPT
121 PIREFNKRGS DHLFDQSRSD HYGWEDNIRK PRETKYHTDD FREEAMMEGA RSSDYNNTDY
181 PEDNSRIRRR RSEFTGEKET QRRDGGDGEG GFHRSSNIPC KFFAAGTGFC RNGKYCRFSH
241 HVADRKQPQD NNNNFYRQDN NNHTSGHNKW NDVERLDNGR VGGIEVSRAS KKGVSESKGN
301 GSSSWIDDME MSPDWNYGVQ ALKKPVKEDH SVGIIGQSSQ SRVLKDDQRS SGMFSHGGRT
361 MAEKPVAASH QSYSNSVNVA PVETFNQNHN ALPYQSSLTA GGSQQVLAAA ATNFSVGSNL
421 SNLESGKVYQ DNHHSTVEKP VLVQNTVSRE QIDQITNISA SLAQFLANGQ PIPQLEQALQ
481 LPLHSESVQP NQATTQSNVV SSNPNQLWGL GMSTGAEGVP AVTASKISNV EEIQEVSLDP
541 KENGDKKTDE ASKEEEGKKT GEDTNDAENV VDEDEDGDDD GSDEENKKEK DPKGMRAFKF
601 ALVEVVKELL KPAWKEGKLN KDGYKNIVKK VAEKVTGTMQ SGNVPQTQEK IDHYLSASKP
661 KLTKLVQAYV GKIKKT
//