LOCUS AEE76121.1 568 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate
hydrolases superfamily protein protein.
ACCESSION CP002686-3472
PROTEIN_ID AEE76121.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G18600"
/inference="Similar to RNA sequence,
EST:INSD:EL189089.1,INSD:BP800700.1,INSD:BP562122.2,
INSD:BP810296.2,INSD:EG506159.1,INSD:ES058916.1,
INSD:BP670863.1,INSD:BP582721.1,INSD:ES047625.1,
INSD:DR368564.1,INSD:EG506158.1,INSD:BP801677.1,
INSD:ES139164.1,INSD:AV829159.1,INSD:ES187134.1,
INSD:ES057302.1,INSD:AV815176.1,INSD:BP639062.1,
INSD:AV804704.1,INSD:ES063903.1,INSD:EL149587.1,
INSD:ES148135.1,INSD:AV557736.1,INSD:ES046069.1,
INSD:BP613949.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY096431.1,INSD:AY070052.1,INSD:BX823774.1"
/note="P-loop containing nucleoside triphosphate
hydrolases superfamily protein; FUNCTIONS IN: helicase
activity, ATP binding, ATP-dependent helicase activity,
nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q
motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH
box type, N-terminal (InterPro:IPR011545), RNA helicase,
ATP-dependent, DEAD-box, conserved site
(InterPro:IPR000629), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: DEA(D/H)-box RNA helicase
family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to
43105 proteins in 3082 species: Archae - 753; Bacteria -
22440; Metazoa - 6214; Fungi - 4682; Plants - 2500;
Viruses - 12; Other Eukaryotes - 7709 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G18600"
/db_xref="Araport:AT3G18600"
intron_pos 115:0 (1/11)
intron_pos 177:0 (2/11)
intron_pos 239:0 (3/11)
intron_pos 267:0 (4/11)
intron_pos 281:0 (5/11)
intron_pos 304:0 (6/11)
intron_pos 404:0 (7/11)
intron_pos 417:0 (8/11)
intron_pos 452:0 (9/11)
intron_pos 475:0 (10/11)
intron_pos 517:0 (11/11)
BEGIN
1 MVESDKSSVE ELKKRVRKRS RGKKNEQQKA EEKTHTVEEN ADETQKKSEK KVKKVRGKIE
61 EEEEKVEAME DGEDEKNIVI VGKGIMTNVT FDSLDLSEQT SIAIKEMGFQ YMTQIQAGSI
121 QPLLEGKDVL GAARTGSGKT LAFLIPAVEL LFKERFSPRN GTGVIVICPT RELAIQTKNV
181 AEELLKHHSQ TVSMVIGGNN RRSEAQRIAS GSNLVIATPG RLLDHLQNTK AFIYKHLKCL
241 VIDEADRILE ENFEEDMNKI LKILPKTRQT ALFSATQTSK VKDLARVSLT SPVHVDVDDG
301 RRKVTNEGLE QGYCVVPSKQ RLILLISFLK KNLNKKIMVF FSTCKSVQFH TEIMKISDVD
361 VSDIHGGMDQ NRRTKTFFDF MKAKKGILLC TDVAARGLDI PSVDWIIQYD PPDKPTEYIH
421 RVGRTARGEG AKGKALLVLI PEELQFIRYL KAAKVPVKEL EFNEKRLSNV QSALEKCVAK
481 DYNLNKLAKD AYRAYLSAYN SHSLKDIFNV HRLDLLAVAE SFCFSSPPKV NLNIESGAGK
541 VRKARKQQGR NGFSPYSPYG KSTPTKEA
//