LOCUS AEE76088.1 348 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA-BINDING TRANSCRIPTION FACTOR 2 protein.
ACCESSION CP002686-3430
PROTEIN_ID AEE76088.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SHH2"
/locus_tag="AT3G18380"
/gene_synonym="DNA-BINDING TRANSCRIPTION FACTOR 2"
/gene_synonym="DTF2"
/gene_synonym="SAWADEE homeodomain homolog 2"
/inference="Similar to RNA sequence,
EST:INSD:AV538744.1,INSD:CB260957.1,INSD:EH890389.1,
INSD:EL329578.1,INSD:EL207028.1,INSD:AV519510.1,
INSD:DR369520.1,INSD:DR369521.1,INSD:AV551055.1,
INSD:AV820369.1,INSD:BP848562.1,INSD:AV525845.1,
INSD:ES185811.1,INSD:BP665909.1,INSD:AI996272.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT003428.1,INSD:AY093042.1"
/note="sequence-specific DNA binding transcription
factors;sequence-specific DNA binding; FUNCTIONS IN:
sequence-specific DNA binding, sequence-specific DNA
binding transcription factor activity; INVOLVED IN:
regulation of transcription, DNA-dependent; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G15215.2); Has 91 Blast hits to 88
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G18380"
/db_xref="Araport:AT3G18380"
intron_pos 19:0 (1/8)
intron_pos 47:2 (2/8)
intron_pos 63:0 (3/8)
intron_pos 130:1 (4/8)
intron_pos 155:2 (5/8)
intron_pos 173:0 (6/8)
intron_pos 221:0 (7/8)
intron_pos 261:0 (8/8)
BEGIN
1 MGRPPSNGGP AFRFILPEVT EMEAILLQHN TAMPGRHILE ALADKFSESP ERKGKVVVQF
61 KQIWNWFQNR RYALRARGNK APGKLNVSSM PRMDLPNQMR SVIQPLSVPK TTHMTGNLPG
121 MTPAPSGSLV PGVMRSGSDN SYLEFEAKSA RDGAWYDVQA FLAHRNLEIG DPEVQVRFAG
181 FEVEEDEWIN VKKHVRQRSL PCEASECVAV LAGDLVLCFQ EGKDQALYFD AIVLDAQRRR
241 HDVRGCRCRF LVRYSHDQSE EIVPLRKICR RPETDYRLQQ LHNAVNDLAN SNQHQIPALD
301 AAAKTPLSLP GATVPIVAPE SKDPSLSATP ATLVQPSSNA ATVPAGSA
//