LOCUS AEE76024.1 1010 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Outer arm dynein light chain 1 protein
protein.
ACCESSION CP002686-3345
PROTEIN_ID AEE76024.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G17920"
/inference="Similar to RNA sequence,
EST:INSD:AV547202.1,INSD:EL988976.1,INSD:EL262227.1,
INSD:EL126198.1,INSD:EH886668.1,INSD:ES034440.1,
INSD:ES067787.1,INSD:EL340315.1"
/note="Outer arm dynein light chain 1 protein; CONTAINS
InterPro DOMAIN/s: Leucine-rich repeat
(InterPro:IPR001611); BEST Arabidopsis thaliana protein
match is: Outer arm dynein light chain 1 protein
(TAIR:AT1G48540.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT3G17920"
/db_xref="Araport:AT3G17920"
intron_pos 148:0 (1/10)
intron_pos 234:0 (2/10)
intron_pos 315:0 (3/10)
intron_pos 365:0 (4/10)
intron_pos 756:2 (5/10)
intron_pos 781:1 (6/10)
intron_pos 808:2 (7/10)
intron_pos 850:2 (8/10)
intron_pos 886:1 (9/10)
intron_pos 940:0 (10/10)
BEGIN
1 MAIVTGDRYL ENLQRFLDEK ADLLIDGTDV LKLNPAGLHY VHLRLESLRE LELMLSGAPV
61 DYLRAYVSDI GDFRALEQLR RILRLLPSLK VVSSLPSPAR DPTPLSLLPF SKLKVLELRG
121 CDLSTSSAKG LLELRHTLEK LICHNSTDAL RHVFASRIAE IKDSPQWNKL AFISCACNRL
181 VLMDESLQLL PAVESLDLSR NKFAKVDNLR RCNKLKHLDL GFNQLRKISH LSEVSCHLVK
241 LVLRNNALTT LRGIENLKSL EGLDVSFNLI SDFSELEFLG SLSFLTDLWL EGNPICCARW
301 YRAHVLSYVY LPNDLKLDGK HIGNREFWKR QVVVTRRKSQ PASYGFYSPA RDEADDEGSF
361 TRKKTKIYRL ASIDSEEEST YVNSDQESAS CEPETQSKEE NIKSDHEADV FGLICKVEQL
421 KKERSVLWLR EFKEWIDHPS EDFVDVSKNG SSTDSEQKYY MKNRNGPKHH GETMRYTPGP
481 LPSFQITDLN QKHQAFFLDG KPDENGNMST LDASQDMTGS FSPSSPPHYQ KDVLHRRQNL
541 VEEILQISAD SYSVASSDSS CSENENYDSE QSNPEQDTLK DHLSGNRGED TSLLDSQPEK
601 SSIIKSWKIE DSFKAKTTNF LSGLHKSELA SGVNQIYRWF DKKQSKRKPK KRNVSPLEEY
661 SFIKKGETSH RSDADIIDSC EDEYISDHFQ EGSLTTGCNS KRSTRFLETE KSLEGMGGLV
721 EEFFTTTLSD SSNDETCRIY VSCDCILQQE STYKQREVVL LLSSQEKLYV LLVGVSTDLQ
781 ESSLSLLCSH TIGDIRDVSV GLGLQVVRLR FREDAEYIFM TASIEKTTVL LNIIKFLDYQ
841 VTESKFSLKS LENVQVELFE KEICSGLKLS IFQYIVLHFQ SSTFGEVSWL PRSLFVAGGH
901 LFICNEDFRQ LSFLPTDDAS SSPYFSLDSS CSISDIFEMV VESRGSSCLS LKVKQKDSTF
961 QSSQKRTVNS VTWKLKLLSP ECVPKFVALV NGLHPDSTEF PLFVRHLGER
//