LOCUS AEE75954.1 216 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Putative plant snare 13 protein.
ACCESSION CP002686-3253
PROTEIN_ID AEE75954.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="NPSN13"
/locus_tag="AT3G17440"
/gene_synonym="ATNPSN13"
/gene_synonym="novel plant snare 13"
/inference="Similar to RNA sequence,
EST:INSD:EH925809.1,INSD:ES022952.1,INSD:EH804792.1,
INSD:EL171283.1,INSD:AV556831.1,INSD:AV809840.1,
INSD:ES084885.1,INSD:BP612283.1,INSD:BP858698.1,
INSD:BP580398.1,INSD:AV557440.1,INSD:EL025525.1,
INSD:EL002738.1,INSD:DR271372.1,INSD:ES183875.1,
INSD:DR271370.1,INSD:DR271368.1,INSD:ES183223.1,
INSD:BP569940.1,INSD:BP607623.1,INSD:BP581616.1,
INSD:ES170736.1,INSD:EL110092.1,INSD:DR271367.1,
INSD:EL083035.1,INSD:EL307494.1,INSD:EH926595.1,
INSD:DR271369.1,INSD:BP581914.1,INSD:BP579960.1,
INSD:BP802137.1,INSD:EH891672.1,INSD:BP606561.1,
INSD:EH858284.1,INSD:EL970098.1,INSD:EL325083.1,
INSD:BP624753.1,INSD:EH966523.1,INSD:DR271375.1,
INSD:EL230575.1,INSD:ES009355.1,INSD:BP805990.1,
INSD:ES006293.1,INSD:BP636204.1,INSD:DR271374.1,
INSD:EL213426.1,INSD:EL992125.1,INSD:EH993217.1,
INSD:DR271371.1,INSD:EL982660.1,INSD:BP600785.1,
INSD:BP575704.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX823575.1"
/note="novel plant snare 13 (NPSN13); FUNCTIONS IN:
molecular_function unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE
coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis
thaliana protein match is: novel plant snare 12
(TAIR:AT1G48240.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G17440"
/db_xref="Araport:AT3G17440"
intron_pos 26:2 (1/8)
intron_pos 57:2 (2/8)
intron_pos 89:0 (3/8)
intron_pos 101:2 (4/8)
intron_pos 135:1 (5/8)
intron_pos 162:0 (6/8)
intron_pos 181:0 (7/8)
intron_pos 213:1 (8/8)
BEGIN
1 MASNLPMSPQ LEQIHGEIRD HFRALANGFQ RLDKIKDSTR QSKQLEELTD KMRECKRLVK
61 EFDRELKDEE ARNSPEVNKQ LNDEKQSMIK ELNSYVALRK TYMSTLGNKK VELFDMGAGV
121 SGEPTAEENV QVASSMSNQE LVDAGMKRMD ETDQAIERSK QVVEQTLEVG TQTAANLKGQ
181 TDQMGRVVNH LDTIQFSIKK ASQLVKEIGR QVCGYR
//