LOCUS AEE75947.1 309 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRAF-like family protein protein.
ACCESSION CP002686-3244
PROTEIN_ID AEE75947.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G17380"
/inference="Similar to RNA sequence,
EST:INSD:AV563228.1,INSD:BP790958.1,INSD:BP593492.1,
INSD:BP644862.1,INSD:BP664192.1,INSD:BP582139.1,
INSD:BP621042.1,INSD:BP666583.1,INSD:BP624238.1,
INSD:BP663872.1,INSD:BP612764.1,INSD:BP792348.1,
INSD:T88102.1,INSD:BP670130.1,INSD:BP786397.1,
INSD:AV791622.1,INSD:BP648545.1,INSD:BP639301.1,
INSD:AV819318.1,INSD:BP659139.1,INSD:BP593568.1,
INSD:BP638715.1,INSD:AV558838.1,INSD:BP575237.1,
INSD:EL045774.1,INSD:BP568552.1,INSD:BP604842.1,
INSD:BP659278.1,INSD:BP614822.1,INSD:BP662317.1,
INSD:BP792165.1,INSD:AV546478.1,INSD:BP780277.1,
INSD:BP651328.1,INSD:BP657780.1,INSD:AV817699.1,
INSD:BP654070.1,INSD:BP654752.1,INSD:BP590210.1,
INSD:BP651024.1,INSD:EL306356.1,INSD:BP633673.1,
INSD:BP582280.1,INSD:BP663137.1,INSD:AV814332.1,
INSD:BP663594.1,INSD:BP792150.1,INSD:BP573623.1,
INSD:BP639613.1,INSD:AV518989.1,INSD:BP629973.1,
INSD:BP625846.1,INSD:BP569226.1,INSD:BP661249.1,
INSD:BP606532.1,INSD:BP780649.1,INSD:BP657055.1,
INSD:AV519086.1,INSD:DR350546.1,INSD:BP664725.1,
INSD:BP670937.1,INSD:BP565849.1,INSD:AV536470.1,
INSD:BP669699.1,INSD:BP567272.1,INSD:BP583187.1,
INSD:AV804774.1,INSD:BP665574.1,INSD:EL155875.1,
INSD:BP672123.1,INSD:EG478430.1,INSD:BP620120.1,
INSD:BP563597.1,INSD:BP660871.1,INSD:BP564240.1,
INSD:BP783893.1,INSD:BP628265.1,INSD:BP632079.1,
INSD:AV789308.1,INSD:BP620635.1,INSD:EH925444.1,
INSD:BP640687.1,INSD:AV557744.1,INSD:AV791370.1,
INSD:AV786427.1,INSD:EL225876.1,INSD:BP614294.1,
INSD:DR350547.1,INSD:BP601196.1,INSD:AV561653.1,
INSD:BP632418.1,INSD:BP596128.1,INSD:BP596082.1,
INSD:AV798474.1,INSD:AV815997.1,INSD:BP616669.1,
INSD:BP665762.1,INSD:BP646854.1,INSD:BP781468.1,
INSD:BP664029.1,INSD:BP782445.1,INSD:BP668186.1,
INSD:BP784372.1,INSD:BP664659.1,INSD:BP577210.1,
INSD:BP593625.1,INSD:BP670006.1,INSD:BP610595.1,
INSD:BP566428.1,INSD:AV803056.1,INSD:AV790772.1,
INSD:EL046532.1,INSD:BP586776.1,INSD:BP635621.1,
INSD:BP571076.1,INSD:AV820989.1,INSD:BP654989.1,
INSD:EL326139.1,INSD:BP668991.1,INSD:BP617759.1,
INSD:BP650158.1,INSD:AV802291.1,INSD:BP667281.1,
INSD:EL337668.1,INSD:BP660582.1,INSD:BP614324.1,
INSD:DR379784.1,INSD:BP662510.1,INSD:AV534650.1,
INSD:BP593877.1,INSD:BP792221.1,INSD:EH989524.1,
INSD:BP646559.1,INSD:BP671480.1,INSD:AV543354.1,
INSD:BP640386.1,INSD:AV785855.1,INSD:BP572636.1,
INSD:BP671341.1,INSD:BP671684.1,INSD:BP609762.1,
INSD:AV796358.1,INSD:BP671434.1,INSD:AV803485.1,
INSD:BP671332.1,INSD:Z29938.1,INSD:AV563227.1,
INSD:BP779712.1,INSD:BP779163.1,INSD:AV558134.1,
INSD:BP635068.1,INSD:BP648406.1,INSD:EH814845.1,
INSD:BP576671.1,INSD:AV797306.1,INSD:AV799228.1,
INSD:BP781676.1,INSD:AV803394.1,INSD:BP626116.1,
INSD:BP625504.1,INSD:AV534388.1,INSD:BP778762.1,
INSD:BP777589.1,INSD:BP567724.1,INSD:BP644863.1,
INSD:BP792851.1,INSD:BP665969.1,INSD:AV802635.1,
INSD:BP672192.1,INSD:BP671135.1,INSD:BP571449.1,
INSD:BP646627.1,INSD:BP638200.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY085057.1"
/note="TRAF-like family protein; CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083); BEST Arabidopsis thaliana protein
match is: TRAF-like family protein (TAIR:AT3G20370.1); Has
1739 Blast hits to 1291 proteins in 145 species: Archae -
0; Bacteria - 0; Metazoa - 259; Fungi - 101; Plants -
1336; Viruses - 0; Other Eukaryotes - 43 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G17380"
/db_xref="Araport:AT3G17380"
intron_pos 9:1 (1/5)
intron_pos 52:2 (2/5)
intron_pos 109:1 (3/5)
intron_pos 203:2 (4/5)
intron_pos 259:1 (5/5)
BEGIN
1 MASSGDYDEI IKSISDAPPT HYMVKIESFS LLTKHAIERY ETESFEAGGY KWKLVLYPNG
61 NKSKNTKDHV SVYLSLADSS SLSPGWEVYA VFRLYLLDQN KDNYLILQGN ERRFHSVKRE
121 WGFDKFIPTG TFSDASNGYL MEDTCMFGAD VFVSKERRSG RGECLSMIKD ATSSKHVWKI
181 ENFSKLDKES YDSNAFFAGD RKWKIEFYPT GTKQGTGTHL SIYLTLVDPE TISDGTKIFV
241 EFTIRIFDQL QGRHIAGKVT KWFSRSSSEH GWVKYVSMVY FTQPNSGLLL KDVCLVEADV
301 CVHGITSAI
//