LOCUS AEE75918.1 1029 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin protein ligase 6 protein.
ACCESSION CP002686-3206
PROTEIN_ID AEE75918.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="UPL6"
/locus_tag="AT3G17205"
/gene_synonym="ubiquitin protein ligase 6"
/inference="Similar to RNA sequence,
EST:INSD:BP609214.1,INSD:EL011399.1,INSD:EG419488.1,
INSD:EL273882.1,INSD:EG446111.1,INSD:EG419489.1,
INSD:EL202201.1,INSD:ES081940.1,INSD:ES207658.1,
INSD:AV802047.1,INSD:EG419607.1,INSD:EL997161.1,
INSD:ES108814.1,INSD:EH827498.1,INSD:AV538956.1,
INSD:EL084126.1,INSD:AI996076.1,INSD:EL044895.1,
INSD:AV811011.1,INSD:EG445006.1,INSD:ES200200.1,
INSD:AV556840.1,INSD:EG485173.1,INSD:AV828603.1,
INSD:EG419606.1,INSD:ES044767.1,INSD:ES100300.1,
INSD:EG446112.1,INSD:EG459725.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY093202.1,INSD:BT010593.1"
/note="ubiquitin protein ligase 6 (UPL6); CONTAINS
InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ
calmodulin-binding region (InterPro:IPR000048); BEST
Arabidopsis thaliana protein match is: ubiquitin-protein
ligase 7 (TAIR:AT3G53090.2); Has 4447 Blast hits to 4367
proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa
- 2469; Fungi - 809; Plants - 361; Viruses - 0; Other
Eukaryotes - 808 (source: NCBI BLink)."
/db_xref="TAIR:AT3G17205"
/db_xref="Araport:AT3G17205"
intron_pos 54:0 (1/25)
intron_pos 86:2 (2/25)
intron_pos 129:1 (3/25)
intron_pos 166:2 (4/25)
intron_pos 227:0 (5/25)
intron_pos 288:0 (6/25)
intron_pos 349:0 (7/25)
intron_pos 376:1 (8/25)
intron_pos 414:0 (9/25)
intron_pos 512:2 (10/25)
intron_pos 545:0 (11/25)
intron_pos 592:0 (12/25)
intron_pos 620:0 (13/25)
intron_pos 649:0 (14/25)
intron_pos 696:0 (15/25)
intron_pos 738:0 (16/25)
intron_pos 771:0 (17/25)
intron_pos 793:2 (18/25)
intron_pos 816:0 (19/25)
intron_pos 873:0 (20/25)
intron_pos 903:0 (21/25)
intron_pos 930:0 (22/25)
intron_pos 954:2 (23/25)
intron_pos 978:2 (24/25)
intron_pos 1008:2 (25/25)
BEGIN
1 MFFSGDPSTR KRVDLGGRST KERDARKLLE QTRMERNRRL LQKQQNSAAL KIQKFFRGRR
61 SMAIERSKVR HDFCETYGNN CQNVDRHCFE PGSSFLRQFL FFFKAQNSGD FVILVETCRL
121 LQSFVDSSGD IVSLFSGLDY SSEHNLVDFR VKKLAFTCIE AIHQNRNRLR DQLLVTPEEA
181 SISTAILMEA VSLLLDPKLP WVCKIVSYLQ KRKVFKLVRE MVTTAKESPR GKTMTGNILS
241 LERVLILIVP HIGREPCCCT VVDPRWSFSS MILTIPLIWK LFPNLKVVFA NPSLSQHYIH
301 QMASCIQKDT CVLPMETSPE FPGYACLLGN TLDTANVVLS QPECSLDMAI DIALVATFFL
361 ETLPPVKSSE GESRQGSSDE DDMLIDDVPG LVLNKALEQQ ITNAIDSRFL LQLTNVLFRQ
421 VSLGMQSYDE DKEALAIGTA SSFLYAAFNT LPLERIMTIL AYRTELVAVL WNYMKRCHEN
481 QKWSSMPKLL AYLPGDAPGW LLPLVVFCPV YKHMLMIVDN EEFYEREKPL SLQDIRLLII
541 ILKQALWQLL WVNPLTQPNT GKSVSNDLSK KNPIELIQNR MGIVVSELLS QLQDWNNRKQ
601 FTSSSDFQAD SVNEYFISQA IMEGTRANYI LMQAPFLIPF TSRVKIFTTQ LATARQSHGS
661 QGIFARNRFR IRRDHILEDA YNQMSALSED DLRSSIRVTF VNELGVEEAG IDGGGIFKDF
721 MEKITRAAFD VQYGLFKETA DHMLYPNPGS GMIHEQHLQF FHFLGSLLAK AMFEGILVDI
781 PFATFFLSKL KQKYNYLNDL PSLDPELYRH LIFLKRYKGD ISDLELYFVI LNNEYGERTE
841 EELLPGGQDM RVTNENVITF IHLVSNHRLN FQIRQQSSHF LRGFQQLIPK EWIDMFNEHE
901 LQVLISGSVD SLDIDDLRNN TNYAGGYHAG HYVIDMFWEV MKSFSTENQK KFLKFVTGCS
961 RGPLLGFKYL EPAFCIQRAA GSASNESVDR LPTSATCMNL LKLPPYQSKE LLETKLMYAI
1021 SAEAGFDLS
//