LOCUS AEE75905.1 230 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana sequence-specific DNA binding transcription
factor protein.
ACCESSION CP002686-3189
PROTEIN_ID AEE75905.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G17100"
/gene_synonym="AIF3"
/gene_synonym="ATBS1 Interacting Factor 3"
/inference="Similar to RNA sequence,
EST:INSD:T04739.1,INSD:AV781604.1,INSD:EL038426.1,
INSD:BP856177.1,INSD:EH988393.1,INSD:CB256314.1,
INSD:BP605743.1,INSD:EL120449.1,INSD:BP611506.1,
INSD:CB255690.1,INSD:DR379488.1,INSD:EH945562.1,
INSD:EL266094.1,INSD:EG440967.1,INSD:EH811294.1,
INSD:BP815746.1,INSD:DR240139.1,INSD:EH865274.1,
INSD:ES167507.1,INSD:EH878577.1,INSD:EL243612.1,
INSD:EL025451.1,INSD:DR240147.1,INSD:EL255233.1,
INSD:EL211766.1,INSD:DR240148.1,INSD:EL278650.1,
INSD:ES089959.1,INSD:ES172710.1,INSD:ES048807.1,
INSD:EH821622.1,INSD:EL329395.1,INSD:EL013886.1,
INSD:N37586.1,INSD:DR240144.1,INSD:EH886062.1,
INSD:EL146083.1,INSD:BP845467.1,INSD:AV543019.1,
INSD:AV540219.1,INSD:AA395637.1,INSD:AV528077.1,
INSD:BP837125.1,INSD:EH936178.1,INSD:EL120091.1,
INSD:BP588122.1,INSD:AV544699.1,INSD:EG440969.1,
INSD:AV532601.1,INSD:T21622.1,INSD:AV521311.1,
INSD:EL074679.1,INSD:AV522187.1,INSD:DR240143.1,
INSD:EL155239.1,INSD:EL135420.1,INSD:EL042654.1,
INSD:ES155353.1,INSD:BP820764.1,INSD:EG440968.1,
INSD:EH819220.1,INSD:EL262260.1,INSD:DR240149.1,
INSD:AV538510.1,INSD:DR240150.1,INSD:N65116.1,
INSD:H36997.1,INSD:N65334.1,INSD:ES194328.1,
INSD:AV819538.1,INSD:DR240138.1,INSD:EL164364.1,
INSD:CF652707.1,INSD:EL121447.1,INSD:EH920241.1,
INSD:DR240151.1,INSD:EL285502.1,INSD:T75970.1,
INSD:EL151259.1,INSD:EH856392.1,INSD:AV549242.1,
INSD:EH845994.1,INSD:EL259641.1,INSD:BP624752.1,
INSD:EH972519.1,INSD:EL318942.1,INSD:EG518580.1,
INSD:T75749.1,INSD:EH951227.1,INSD:T42679.1,
INSD:AV802402.1,INSD:DR240140.1,INSD:BP805674.1,
INSD:T14007.1,INSD:EH929324.1,INSD:EH799399.1,
INSD:AV553147.1,INSD:EL144619.1,INSD:EL028995.1,
INSD:DR376264.1,INSD:EL049181.1,INSD:AV537398.1,
INSD:EL037578.1,INSD:BP585735.1,INSD:ES010542.1,
INSD:EH948758.1,INSD:H36403.1,INSD:EH836453.1,
INSD:DR240142.1,INSD:EL192700.1,INSD:ES155935.1,
INSD:EH940093.1,INSD:EL005737.1,INSD:ES043077.1,
INSD:DR240146.1,INSD:DR240141.1,INSD:DR240145.1,
INSD:EL168089.1,INSD:EG518581.1,INSD:ES041151.1,
INSD:EL161622.1,INSD:DR240137.1,INSD:EL013806.1,
INSD:EL276166.1,INSD:BP856863.1,INSD:EL236101.1,
INSD:ES154114.1,INSD:EL121703.1,INSD:EH940384.1,
INSD:BE038100.1,INSD:ES169938.1,INSD:DR240152.1,
INSD:EH926164.1,INSD:EL261017.1,INSD:BP834756.1,
INSD:EH993207.1,INSD:EG440972.1,INSD:EL069066.1,
INSD:CF651767.1,INSD:EH867179.1,INSD:ES160833.1,
INSD:EL082066.1,INSD:AV563133.1,INSD:EH799067.1,
INSD:EH880559.1,INSD:AV540143.1,INSD:ES044244.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK230300.1,INSD:AY057736.1"
/note="sequence-specific DNA binding transcription
factors; FUNCTIONS IN: sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
(TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 166; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G17100"
/db_xref="Araport:AT3G17100"
BEGIN
1 MESISPVSNQ LLQPTTTSSN SDRSRRKRKK KSSPSSVEKS PSPSISLEKW RSEKQQQIYS
61 TKLVHALREL RISQQPSSSS SSSIPRGGRA VREVADRALA VAARGKTLWS RAILSKAVKL
121 KFRKHKRQRI SNPTTTTLTT GSIRSKKQRA TVLRLKAKGL PAVQRKVKVL SRLVPGCRKQ
181 SLPVVLEETT DYIAAMEMQI RTMTAILSAV SSSPPPPTPG HEGGQTHMLG
//