LOCUS AEE75899.1 344 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pectin lyase-like superfamily protein protein.
ACCESSION CP002686-3182
PROTEIN_ID AEE75899.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G17060"
/inference="Similar to RNA sequence,
EST:INSD:BP819914.1,INSD:DR334232.1,INSD:DR334233.1,
INSD:DR334234.1,INSD:DR334235.1,INSD:AU230507.1,
INSD:DR334236.1,INSD:DR375764.1,INSD:DR372192.1,
INSD:BP638380.1,INSD:AU239224.1,INSD:DR334231.1,
INSD:BP820939.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY085221.1,INSD:BT005685.1,INSD:AK118362.1"
/note="Pectin lyase-like superfamily protein; FUNCTIONS
IN: pectinesterase activity; INVOLVED IN: cell wall
modification; LOCATED IN: endomembrane system, cell wall,
plant-type cell wall; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Pectinesterase, active site
(InterPro:IPR018040), Pectin lyase fold/virulence factor
(InterPro:IPR011050), Pectinesterase, catalytic
(InterPro:IPR000070), Pectin lyase fold
(InterPro:IPR012334); BEST Arabidopsis thaliana protein
match is: Pectin lyase-like superfamily protein
(TAIR:AT5G19730.1); Has 2473 Blast hits to 2430 proteins
in 320 species: Archae - 8; Bacteria - 629; Metazoa - 1;
Fungi - 193; Plants - 1617; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink)."
/db_xref="TAIR:AT3G17060"
/db_xref="Araport:AT3G17060"
intron_pos 84:2 (1/4)
intron_pos 139:0 (2/4)
intron_pos 208:0 (3/4)
intron_pos 290:2 (4/4)
BEGIN
1 MGHRTRMILV LTLVVMSIWG SDASAMQKTK FDAPLLTEKI ATNRSIIVDI EGKGDYTSVQ
61 KAIDAVPVGN SNWIIVHVRK GIYKERVHIP ENKPFIFMRG NGKGKTVIES SQSSVDNVAS
121 ATFKVEANHF VAFGISIRND APVGMAFTSE NQSVAAFVAA DKVAFYHCAF YSLHNTLFDN
181 KGRHYYHECY IQGSIDFIFG RATSIFNNCE IFVISDKRVK PYGSITAHHR ESAEEKTGYV
241 FIRGKVYGID EVYLGRAKGP YSRVIFAKTY LSKTVVPDGW TNWSYHGSTQ NLYHGEYKCH
301 GPGAERQKRS DWAKDLTKQE VESFLSIDFI DGTSWLPVWL QEKF
//