LOCUS       AEE75891.1               114 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA polymerases M/15 Kd subunit protein.
ACCESSION   CP002686-3171
PROTEIN_ID  AEE75891.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="NRPB9A"
                     /locus_tag="AT3G16980"
                     /gene_synonym="NRPD9A"
                     /gene_synonym="NRPE9A"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES086546.1,INSD:ES102147.1,INSD:DR243688.1,
                     INSD:DR243686.1,INSD:DR243690.1,INSD:DR243691.1,
                     INSD:DR243687.1,INSD:EL324129.1,INSD:DR243689.1,
                     INSD:DR243692.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:BT012109.1,INSD:BT012363.1"
                     /note="NRPB9A; FUNCTIONS IN: DNA-directed RNA polymerase
                     activity, transcription regulator activity, DNA binding,
                     zinc ion binding, nucleic acid binding; INVOLVED IN:
                     transcription, regulation of transcription; LOCATED IN:
                     DNA-directed RNA polymerase V complex, DNA-directed RNA
                     polymerase II, core complex; EXPRESSED IN: 11 plant
                     structures; EXPRESSED DURING: 7 growth stages; CONTAINS
                     InterPro DOMAIN/s: Zinc finger, TFIIS-type
                     (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa
                     subunit (InterPro:IPR001529), DNA-directed RNA polymerase
                     M, 15kDa subunit, conserved site (InterPro:IPR019761);
                     BEST Arabidopsis thaliana protein match is: RNA
                     polymerases M/15 Kd subunit (TAIR:AT4G16265.1); Has 955
                     Blast hits to 950 proteins in 294 species: Archae - 163;
                     Bacteria - 0; Metazoa - 246; Fungi - 231; Plants - 130;
                     Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G16980"
                     /db_xref="Araport:AT3G16980"
     intron_pos      10:2 (1/3)
     intron_pos      36:0 (2/3)
     intron_pos      89:0 (3/3)
BEGIN
        1 MSTMKFCREC NNILYPKEDK EQKILLYACR NCDHQEVADN SCVYRNEVHH SVSERTQILT
       61 DVASDPTLPR TKAVRCSKCQ HREAVFFQAT ARGEEGMTLF FVCCNPNCGH RWRE
//